Oryzias melastigma (Indian medaka): 112146281
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Entry
112146281 CDS
T07439
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112146281 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oml04515
]
112146281 (lrrc4ba)
Cell adhesion molecules [BR:
oml04515
]
Immunoglobulin superfamily
NGL family
112146281 (lrrc4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_R13L1-DRL21
LRR_NXF1-5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
112146281
NCBI-ProteinID:
XP_024127781
Ensembl:
ENSOMEG00000018451
LinkDB
All DBs
Position
LG8:complement(2942473..2995053)
Genome browser
AA seq
730 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLWLLLLLPGREFVGAASCPSLCTCSNQASRVICTRQN
LEQVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNL
NTLELFDNRLTQVPSYAFEYLSKLRELWLRNNPIEDLPGYAFNRVPSLRRLDLGELKKLD
FISDAAFVGLVNLRYLNLGMCGLKDIPKLTALERLEELELSGNRLEIIRPGSFQGLGALR
KLWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCN
CDVLWLSWWLKETVPSNTTCCARCHAPPILKGKYIGELDQSHFTCYAPVIVEPPTDLNVT
EGMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTC
MVTNAAGNTTATAVLNVTAADTNVNYTYFTTITVETEGEGGNSYDLGPINGTFLPGHPGP
TSSELWFGGVPTTDSSLPPGRSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCFV
AITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGPGAGGRGSGISGGSTVMQ
GGSSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGIGTGPGAGLNNN
NNPCSQSQTLSCSQIPSAGGGVPTSCTLPSPVPLSQLGLHSSLKGLKGKGQNEPLLFKSG
SKENVQETQI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgccttcccggcccctcccccttcctctttctattggcc
cagctgctattgtggctcctcctcctcctccctgggcgggagtttgtgggagccgcctcc
tgcccctccctctgcacctgctccaaccaggccagccgagtcatctgcaccaggcagaac
ctggagcaggtccccgaaagcatctccgtcaacacgagatacctcaacctgcaggagaac
tccatacaggttatcaagtcggacaccttcaagcacctgaggcatcttgaaatcctccag
ctctccaagaatcagatccgtcagattgaagttggagcgttcaatggcctccccaacctc
aacacactggaactcttcgacaaccgcctcacgcaggtgccgtcgtacgcgttcgagtat
ctcagcaaactgcgggagctgtggctgcgcaacaaccccatcgaggatctaccgggctac
gccttcaaccgcgtgccctcgctccgccggctggatttgggcgaactcaaaaagttggat
ttcatctcggatgcggccttcgtgggcctcgtcaatctgaggtacttgaacctcggcatg
tgtgggctgaaggacattcccaaactgacggcgctggagcggctggaggagctggagttg
tcaggaaaccgcctggaaatcatccgtcccggctccttccagggtctgggggctctccgg
aagttgtggctaatgcattcgcaggtgtccgtcatcgaacgaaacgcctttgacgacctg
aaaaacctggaggagctgaacctgtctcacaattccttgcactcgttgccgcatgatctc
ttcacaccgctccaccagctggagagagtccacctcaaccacaacccctgggtctgcaac
tgtgatgtgctttggctcagctggtggttgaaagagacggtgccgagcaacaccacctgc
tgcgcccgctgtcacgctcccccgatcttaaagggcaagtacatcggcgagcttgaccag
agccactttacctgttatgcacccgtcatcgtggagccgcccactgacctgaatgtcacc
gagggaatggccgccgagctgaagtgccgcacaagcacttccaccacgtctgtcaactgg
atcacccccaacggcacgttaatgacccacgggtcttaccgggtgcggatatccgtcctg
cacgatggcactctcaacttcacaaatgtcaccctgcgagacacgggtcagtacacctgc
atggttaccaacgcggccggcaacaccaccgccaccgctgtcctcaacgttaccgctgcc
gacaccaacgtcaactacacctacttcactacgattaccgtggagacggagggcgaagga
gggaacagctacgacctgggtcccatcaacgggaccttccttccgggtcaccctggtccc
acatcgtcggagctgtggtttggcggcgttcccaccacagattcctccctccctcccggc
agatcctcctcctcccctcgcgccactcgaccaaccttcactgtgccgatcactgagccg
ggcttctcgggtctggacgatgtgatgaagaccaccaagatcatcatcggctgcttcgta
gcgattacctttatggcggcggtgatgctggtggtgttctacaagttgaggaagcagcac
cagctgcacaaacaccacggccccgcccgggccatcgagatcatcaacgtggaggacgag
ctgggacccggagccggcgggcggggcagcggcatctccggaggatccacggtgatgcag
ggcgggagcagtggaataggaggggggcagagcctccggttgcaccatccggagatcgtc
aacttacccaacctggctcggtcagagcacctcaaccactattacaaaacccaccacttc
aacaacaatatgatggggctgggcattggcacggggccgggggcgggccttaacaacaac
aacaacccgtgctcacaatcacagaccttatcctgctcccagatcccatctgctggcggg
ggggtgcccacgagttgcaccctgccctcgccggtacctctgtcccagttgggccttcac
agctctctgaagggcctgaaggggaagggccagaacgagcctctactttttaagagcggc
tcaaaggaaaacgtgcaagagactcagatctaa
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