KEGG   Oryzias melastigma (Indian medaka): 112146308
Entry
112146308         CDS       T07439                                 
Symbol
tob1a
Name
(RefSeq) protein Tob1a
  KO
K14443  protein Tob/BTG
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112146308 (tob1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112146308 (tob1a)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     112146308 (tob1a)
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     112146308 (tob1a)
SSDB
Motif
Pfam: BTG PAM2 T2SSM
Other DBs
NCBI-GeneID: 112146308
NCBI-ProteinID: XP_024127834
Ensembl: ENSOMEG00000015327
UniProt: A0A3B3C7G3
LinkDB
Position
LG8:13976602..13980197
AA seq 343 aa
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEKAAKESGLEIEDVRNNLPQDLSVWIDPYEVSYQIGEKGPIKVLYVDDSNES
GANSGGLDLDKEIKNSFNPEAQVFMPISEPANGASPGSSSPSPPFGHSAAVSPTFMPRST
QPLTFTTATFAATKFGSTKMKSSGRSSNNNNNGGGSSAGNKAARTSPTNLGLNVNSLLKQ
KAISTSMHSLYGLGLGPQQHPKPSALSPNAKEFVFPPLQGQGSQSALFPGDSSLSLSPLQ
YSNAFDMFAAYGGLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcagctcgaaatccaagtagctctcaacttcatcatctcgtacctgtacaataagctg
ccccggaggcgggtcaacatcttcggcgaggagcttgagaggcagctgaagcagaaatat
gaaggacactggtacccagacaagccatacaagggctcaggattccgatgcatccacgtg
ggggagaaggtggaccctgtggtggagaaagcagccaaagagagtgggctagagatcgag
gatgttcgcaataacctgccccaggacctcagcgtgtggattgacccctacgaggtgtct
taccagattggagagaaggggcccatcaaagtattgtatgtcgatgacagcaatgaaagt
ggagccaacagtggaggactcgatctggacaaggagatcaagaacagtttcaaccccgaa
gcgcaggtcttcatgccgatcagtgaacctgcgaacggtgcctcgccgggctccagctct
ccgtctcccccgtttggccactcggcggcggtcagccccaccttcatgccccgctccacc
cagcctttaaccttcactacagccactttcgcagctaccaagttcggctccactaagatg
aagagcagtggacgcagcagcaacaacaacaacaatggcggcggcagcagtgctgggaac
aaagcggcccgtacctctcccaccaacctgggcctgaatgtgaacagtctcctcaaacag
aaagccatctccacctccatgcactcactgtacgggctgggtctcggcccgcagcagcac
ccaaagccctccgccttgtccccgaatgccaaggagttcgtgttccctcccctgcagggc
cagggtagccagagtgctctgttcccaggagacagctcgctcagcctcagcccgctgcag
tacagcaatgccttcgatatgtttgcggcctacggtggccttaacgacaagtccctcatg
gatggcttgaatttcagcttaagcaacatgcagtattctaaccagcaattccagccagtc
atggccaactag

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