Oryzias melastigma (Indian medaka): 112146308
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Entry
112146308 CDS
T07439
Symbol
tob1a
Name
(RefSeq) protein Tob1a
KO
K14443
protein Tob/BTG
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112146308 (tob1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112146308 (tob1a)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112146308 (tob1a)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
112146308 (tob1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
T2SSM
Motif
Other DBs
NCBI-GeneID:
112146308
NCBI-ProteinID:
XP_024127834
Ensembl:
ENSOMEG00000015327
UniProt:
A0A3B3C7G3
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Position
LG8:13976602..13980197
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AA seq
343 aa
AA seq
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MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERQLKQKYEGHWYPDKPYKGSGFRCIHV
GEKVDPVVEKAAKESGLEIEDVRNNLPQDLSVWIDPYEVSYQIGEKGPIKVLYVDDSNES
GANSGGLDLDKEIKNSFNPEAQVFMPISEPANGASPGSSSPSPPFGHSAAVSPTFMPRST
QPLTFTTATFAATKFGSTKMKSSGRSSNNNNNGGGSSAGNKAARTSPTNLGLNVNSLLKQ
KAISTSMHSLYGLGLGPQQHPKPSALSPNAKEFVFPPLQGQGSQSALFPGDSSLSLSPLQ
YSNAFDMFAAYGGLNDKSLMDGLNFSLSNMQYSNQQFQPVMAN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcagctcgaaatccaagtagctctcaacttcatcatctcgtacctgtacaataagctg
ccccggaggcgggtcaacatcttcggcgaggagcttgagaggcagctgaagcagaaatat
gaaggacactggtacccagacaagccatacaagggctcaggattccgatgcatccacgtg
ggggagaaggtggaccctgtggtggagaaagcagccaaagagagtgggctagagatcgag
gatgttcgcaataacctgccccaggacctcagcgtgtggattgacccctacgaggtgtct
taccagattggagagaaggggcccatcaaagtattgtatgtcgatgacagcaatgaaagt
ggagccaacagtggaggactcgatctggacaaggagatcaagaacagtttcaaccccgaa
gcgcaggtcttcatgccgatcagtgaacctgcgaacggtgcctcgccgggctccagctct
ccgtctcccccgtttggccactcggcggcggtcagccccaccttcatgccccgctccacc
cagcctttaaccttcactacagccactttcgcagctaccaagttcggctccactaagatg
aagagcagtggacgcagcagcaacaacaacaacaatggcggcggcagcagtgctgggaac
aaagcggcccgtacctctcccaccaacctgggcctgaatgtgaacagtctcctcaaacag
aaagccatctccacctccatgcactcactgtacgggctgggtctcggcccgcagcagcac
ccaaagccctccgccttgtccccgaatgccaaggagttcgtgttccctcccctgcagggc
cagggtagccagagtgctctgttcccaggagacagctcgctcagcctcagcccgctgcag
tacagcaatgccttcgatatgtttgcggcctacggtggccttaacgacaagtccctcatg
gatggcttgaatttcagcttaagcaacatgcagtattctaaccagcaattccagccagtc
atggccaactag
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