Oryzias melastigma (Indian medaka): 112146346
Help
Entry
112146346 CDS
T07439
Symbol
hgs
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03250
Viral life cycle - HIV-1
oml04144
Endocytosis
oml04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112146346 (hgs)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112146346 (hgs)
04145 Phagocytosis
112146346 (hgs)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112146346 (hgs)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
112146346 (hgs)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
Adaptin_N
HEAT_Maestro
FYVE_2
XMAP215_CLASP_TOG
CID
Cnd1
FIVAR
FYVE_CARP1-2
UIM
Motif
Other DBs
NCBI-GeneID:
112146346
NCBI-ProteinID:
XP_024127891
Ensembl:
ENSOMEG00000006980
LinkDB
All DBs
Position
LG8:complement(10035868..10043477)
Genome browser
AA seq
769 aa
AA seq
DB search
MGKGGGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKHAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTVHDEVASKQTMEELKELLKKQTEPNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEQLNNHPSLSPPLRKAEGKAPSTG
PAELPPEYLTSPLSQQSQMPPKRDEAALQEEEELQLAIALSQSEAEEKERMRQKNSYSVY
PKTDPTPVTSSAPPVSTLYTSPVNSSAPLAEDVDPELARYLNRTYWEKKQEEARKSPTPS
APAPVSLAEPVPAVSQPVETHVPVQPVNIVEQPYQNGESEENHEQFLKDLQYAVTTFLNR
MKSNHMRGRSITNDSAVLSLFQSINNMHPQLLDILNQLDEKRLYYEGLQDKLAQVRDARA
ALNALRDEHREKLRRAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKE
RQMRLEQQKHTIQMRAQMPAFSLPYAQMQSLPPNVAGGMVYQPGAPPSYPGTFSPAGSVE
GSPMHNIYMGQAGQAGPGQYQAMPPSATDPNMVNAYMYPPAGTNGQPPPPTGQAPPTTTP
AYSNYQPTPTQAYQNAVSQAQSMPPMSQAAPTNGMGYMGYQPYNMQNIISALPGQDPNMP
PQQPYMSGQQPMYQQVAPPGGSQQQQPQVQQQGPPAPPGSTEAQLISFD
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggtggtggcacatttgagaggcttctcgataaagccaccagtcagcttctg
ctggaaaccgattgggagtcaattctgcagatctgtgatctcattcgtcaaggagacaca
caagcgaagcatgctattggggccattaagaagaagctgaacgacaaaaatcctcatgtg
gctctctatgcactggaggttctggagtcggtggtgaagaactgtgggcagactgtgcac
gatgaggtggcgagcaagcaaaccatggaggaactaaaagagcttcttaagaagcagaca
gaaccgaatgtcaggaacaagatcctctacctgattcaggcttgggctcacgccttccgt
aacgagccaaaatacaaggttgttcaggacacttatcagatcatgaaagttgaaggtcat
gttttccctgagtttaaggagagtgatgccatgtttgcagcagagagagctccagactgg
gttgatgctgaggagtgtcaccggtgcagagtccagtttggagttatgacgagaaagcat
cactgtcgagcctgtgggcagattttctgtggaaagtgttcatccaagtactccactatt
ccaaagtttggcattgagaaggaagtgcgcgtgtgcgagccctgctttgagcagctcaac
aaccacccctccctctctcctcctcttagaaaagctgaagggaaagctccgtctacaggt
cctgccgagctgccccccgagtatctgaccagccctctgtcccaacagtcccagatgcct
ccaaagagagatgaagcagccctccaggaggaagaggagctgcagttggccattgcactt
tcccaaagcgaggctgaagagaaggaacggatgagacagaagaattcgtattcggtttat
cctaaaaccgatccaactccagtgacttcttctgctccgccagtcagcacactttacacc
tcccctgtgaactcttcagctccattagcagaggatgtggaccctgagctggcccgttac
ctgaacagaacgtactgggagaagaagcaggaagaggctcgaaagagtcccaccccttca
gctcctgctccagtgtctctggctgaacctgtgcctgcagtcagccagcctgtggagact
cacgtccccgttcagcctgtcaacattgtagagcaaccgtatcagaacggcgagtcggag
gaaaaccacgagcagttcctgaaggatctccagtacgccgtcaccaccttcctcaaccgc
atgaagagcaaccacatgcgcgggcgcagcatcaccaacgacagcgcagtgctctcactc
ttccagtccatcaacaacatgcacccgcagctgctggacattctcaaccagttggacgag
aagcggctgtactatgaggggctgcaggacaagctggctcaggtgcgtgacgctcgagcc
gccctgaacgcgctgcgagacgagcacagggagaagctgcggagggctgcagaggaggcg
gagcgacagaggcagatccagctggcacagaagctggagatcatgaggcagaagaagcag
gagtatctggagatgcaaagacagctggcgattcagcgcctccaggagcaggagaaggag
aggcagatgcgtttggagcagcaaaagcacacgatccagatgagagcccagatgccggct
ttctctctgccttacgctcaaatgcaatctttgcctcctaatgttgcgggaggcatggtt
taccagcctggagccccacccagctaccccggcactttcagtcctgctggttctgtggag
ggctcacccatgcacaacatctatatgggtcaggctgggcaggctggaccgggtcagtac
caggccatgcccccgtctgcgacagatccaaacatggtgaatgcttacatgtacccgcct
gccggcaccaacgggcaacctccccctcccaccggtcaagcccctcccactaccactcct
gcttactcaaactatcagcccacccccacacaagcctaccagaatgcagtctcccaggca
cagagcatgccccccatgtcacaggcggcccccaccaacggaatgggttacatgggttac
cagccctacaacatgcagaacatcatttcagctttgccggggcaggatcccaacatgccc
ccccaacaaccctacatgtcagggcagcagcccatgtatcagcaggtggcgccacctggt
ggctcccaacagcagcaaccacaggtacaacagcaagggcctccggcgcctcctggcagc
acagaggcgcagctcatttccttcgactaa
DBGET
integrated database retrieval system
