Oryzias melastigma (Indian medaka): 112146366
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Entry
112146366 CDS
T07439
Symbol
ccdc47
Name
(RefSeq) coiled-coil domain-containing protein 47
KO
K24962
PAT complex subunit CCDC47
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oml03110
]
112146366 (ccdc47)
04131 Membrane trafficking [BR:
oml04131
]
112146366 (ccdc47)
Chaperones and folding catalysts [BR:
oml03110
]
Other chaperones and cochaperones
Others
112146366 (ccdc47)
Membrane trafficking [BR:
oml04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Multi-pass translocon (MPT) complex
112146366 (ccdc47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC47
Motif
Other DBs
NCBI-GeneID:
112146366
NCBI-ProteinID:
XP_024127921
Ensembl:
ENSOMEG00000019796
LinkDB
All DBs
Position
LG8:complement(3569224..3574484)
Genome browser
AA seq
486 aa
AA seq
DB search
MPRTRFLLIPTLLLLLLAFPGSKARYNDDFDDGEDIADFDDNDFAEFEDMNEDLTAETET
APPPRVSSSQPDEDEDEATVELEDGQDGFEDSDTQDQDGKFDQDEFEGFPDSDKPGPSMK
DPLIIHTVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNSRLAHAWFNSHKELLES
NFALVGDDGTSKEAVSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARM
MRPACDQVQVKVTLNDEDMDTFVFAVGTKKAMARMQKEMQDLSEFCGDKPKSGAKYGLPD
SLAILSEMGEVTDGVMDNKMVHYITTHAEKIESIHFSDQFSGPKVMQEEGQPLKLPETKK
TLLFTFNVPGMGNTFPKDMDSLLPLMNMVIYSIDKVKKLRLNREGKQKADKNRARVEENF
LKQTHAQRQEAAQTRREEKKRAEKERIMNEEDPERQRRLEEAAQRREQKKMEKKQMKMKQ
IKVKAM
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgccgagaacacgttttctactcatacccacgctgctgctgctactcctggcctttcct
ggctccaaggcccgttacaatgacgatttcgacgacggagaggacatcgccgactttgat
gacaacgactttgcggagtttgaggacatgaacgaggatttaactgctgagactgaaact
gccccgcctccgcgagtctcctcttcccagcccgatgaagatgaagatgaagccacagtc
gagctggaagacggtcaagacggttttgaggattcagatacccaagatcaagatggaaag
tttgaccaggatgagttcgaggggtttcctgactctgataaacctggcccctccatgaag
gatccgttaatcatccacacggttcctgctcatcttcagaacagctgggaaagttattac
atggaaatcctcatggtgaccggcctgctggcgtacatcatgaactacatcatcggcaag
aacaaaaacagccggctggctcatgcttggttcaattcgcacaaagagcttctggagagc
aacttcgctttagtgggcgatgacggaactagtaaagaagcggtgagcactgggaagctg
aatcaggagaatgaacacatctacaacctgtggtgctctgggcgtgtgtgctgcgaaggc
atgctgattcagctcaagtttctgaagaggcaggatcttctgaatgttcttgccaggatg
atgaggcctgcatgtgaccaagtgcaagtcaaagtgacgcttaacgatgaggacatggat
acgtttgtgttcgccgtggggacaaagaaagccatggctcgaatgcagaaggagatgcaa
gacttgagcgaattctgtggtgacaagccaaagtccggtgctaaatatgggcttccagac
tccctggctattcttagtgagatgggcgaagtcacagatggtgtgatggataacaagatg
gtacactacatcaccacccatgctgaaaagattgagtccatccatttttcagaccaattt
tctggtccaaaagttatgcaagaggagggtcagccactaaagctgcctgagactaagaag
acactcctgtttacatttaatgtgcctggaatgggcaacacatttcccaaagatatggac
tcactgcttcctctcatgaacatggtgatctacagcatcgacaaagtcaagaagctccgt
ctcaacagagagggaaagcagaaggctgacaagaacagggctcgcgtggaggaaaacttc
ctgaaacaaactcacgctcagcgccaggaggcggcccagacccgccgtgaggagaagaag
agagccgagaaggagagaatcatgaatgaagaggatcctgaacggcagcgtcgcctggag
gaagcagctcagcggcgtgagcagaagaagatggaaaagaagcagatgaagatgaaacag
atcaaagttaaagccatgtga
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