Oryzias melastigma (Indian medaka): 112146375
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Entry
112146375 CDS
T07439
Symbol
igf2bp1
Name
(RefSeq) insulin-like growth factor 2 mRNA-binding protein 1 isoform X1
KO
K17391
insulin-like growth factor 2 mRNA-binding protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112146375 (igf2bp1)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112146375 (igf2bp1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
RRM_1
KH-I_KHDC4-BBP
MOEP19
KH_5
KH_Vigilin
RRM_9
Motif
Other DBs
NCBI-GeneID:
112146375
NCBI-ProteinID:
XP_024127934
Ensembl:
ENSOMEG00000012285
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All DBs
Position
LG8:complement(23035856..23086497)
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AA seq
608 aa
AA seq
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MNCSAMHKLYIGNLSDGVTAEDLGRTFDEHKIPYTGQFLMKNGYAFVDCPDDHWAMKAIE
TFSGKVELHGKRIEVEHSVPKKQRTRKLQIRNIPPHLQWEVLDGLLAQCGTVENCEQVNT
DGETAVVNVTYATREHARQAIQKLNGYQFENNALRITYIPDETSEMDGGQRGPDNGRRPG
YGPRGSLRGSSPSSGMPPKTQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDV
HRKENAGAAEKPISIHSTPEGCSAACRMILDIMHQEAKDTKTADEVPLKILAHNNFVGRL
IGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGSIEDCCRAEVEIMKKVREAY
DNDIAAMNQQTHLIPGLNLGALGLFPSSSNMPPPPPGNAVSGAPYGCFGAPEQETVHVYI
PAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVIVTGPPEAQFKAQGRIYG
KLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEVVVPREQTPDEN
DQVIVKINGHFYASQLAQRKIRDILTQVKQAQKGGMGGMSPGPHSHPQGFTEMGSPQGLA
QDHQPRRK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaattgttctgccatgcataagctgtacattgggaatctaagcgacggcgtgaccgcc
gaggacctggggaggacctttgacgagcacaagatcccctacaccggacagttcctcatg
aagaacggctacgccttcgtggactgtcccgacgaccactgggccatgaaagcgatcgag
accttctccggtaaagtggaacttcacgggaaacggatcgaggtggagcactccgtcccc
aagaagcaaaggaccaggaagctgcagatccgaaacatcccgcctcacctgcagtgggag
gtgctggacggtctgctggctcagtgtgggaccgttgaaaactgtgaacaagtcaacaca
gacggcgagacggcggtggttaatgtgacatatgcaaccagagagcacgccaggcaagcc
atccagaagctgaacggataccagtttgagaacaacgccctgcggatcacctacatcccc
gatgaaacctcagagatggacgggggccagcgggggcccgacaacggccggcggcccggc
tacggcccccgcggcagcctgcgcggcagctcccccagctcaggaatgccccccaaaacg
cagcacgccgacatccccctcagactgctggtgcccacacagtacgtgggggccatcatt
ggcaaggagggggccaccattcgcaacatcaccaagcagacgcagagcaagatcgacgtt
caccgcaaagagaacgccggagccgccgagaagcccatcagcatccactccacccccgag
ggctgctccgccgcctgccgcatgatcctggacatcatgcaccaggaggccaaagacacc
aaaacagctgacgaggttcctctcaagattctggctcacaacaacttcgttggtcgcctt
atcgggaaggaaggacgcaacctgaagaaagtggagcaggacacggacaccaagatcacc
atctccccgctccaagacctgacgctgtacaaccccgagagaaccatcacggtgaagggc
tccatcgaggactgctgcagggccgaggtggagatcatgaagaaggtcagagaggcctac
gataacgacattgcagccatgaaccagcagactcacctgatccctggactcaacctgggg
gctctgggcctcttcccctcctcctccaacatgccccccccaccaccggggaatgctgtc
agtggagccccctatggatgcttcggggctccggagcaggagaccgtccacgtctacatc
ccagctcaggcagtgggggccatcatcggcaagaaaggacagcacatcaagcagctgagc
cgcttcgccggagcctccatcaagatcgcaccggcggagagtccggactcaaagatgagg
atggtgatagtgacaggaccccctgaggctcagtttaaggctcagggtaggatctatgga
aaactcaaggaggagaacttcttcgggcccaaggaggaagtgaagctggagacccacatc
aagatggccgctgctgcagctgggagggtcatcggaaaaggaggcaagacggtgaacgag
ctgcagaacctgacggcggcggaggtggtggtgccccgagagcagacgcctgacgagaac
gaccaggtcatcgtcaagatcaacggacatttctatgcaagccagctggcccagaggaag
atccgggacatcctgacccaggtcaaacaggcgcagaaaggtgggatggggggcatgagc
cctggcccccactcccaccctcagggcttcacagagatgggcagcccccagggcctggct
caggaccaccagccacgcaggaagtga
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