Oryzias melastigma (Indian medaka): 112146388
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Entry
112146388 CDS
T07439
Symbol
sgsm3
Name
(RefSeq) small G protein signaling modulator 3
KO
K20176
small G protein signaling modulator 3
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112146388 (sgsm3)
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112146388 (sgsm3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RUN
RabGap-TBC_2
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
112146388
NCBI-ProteinID:
XP_024127949
Ensembl:
ENSOMEG00000015879
UniProt:
A0A3B3C9R8
LinkDB
All DBs
Position
LG8:complement(14334264..14343730)
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AA seq
753 aa
AA seq
DB search
MSGTYTPAPGGPFSALTPSMWPQDILAKYHQKDPKDQPEVQYDEFGFKVNTENDGELQSC
LGSEGSPQREDPQQRLRWQAHLEFTHNHTVGDLTWDLIDPVLPRSERLRSLVLGGIPHSM
RPQLWMRLSGALQKKRTSEISYKEIVKNSSNDDSSTSKQIEKDLLRTMPTNACFNSLNSV
GVPRLRRLLRSLAWLYPDIGYCQGTGMVISCLLLFLEEEDALWMMCALIEDLLPPSYFSS
TLLGVQTDQRVLRQLIVQYLPSLDHLLQEHDIELSLITLHWFLTSFASVVDIRLLLRIWD
LLFYQGSLVLFQVTLGMLKIKEEELVSSENSASIFNTLSDLPSQLRDGASVLGEAMRLAG
GLSQETVEAQRHKHLAYILNEQAQLNNGNNTTLNLNKVVRRQSLRRRSTLTSLLFGQDEA
EALKSKNIKQTKLVASLREAITRTAEHFHCLDPRHSSAELTPDYSMESHQRDHETFLVVS
RNRRRRAKALLDFERHDDDELGFRKNDIITIISQKDEHCWVGELNGLRGWFPAKFVEILD
ERSKEYSLAGDDSVTEAVTDLVRGTLCPALKAIFLHGLKKPSILGGPCHPWLFIEEAASR
EVERDFNSVYSRLVLCKTYRLDEDGKVLTPEELLYRAVQSVNMSHDSAHAQMDVKFRSLI
CVGLNEQVLHLWLEVLCSSMAAVEKWYHPWSFLRSPGWVQIKCELRVLSKFAFSLSQDCE
LPEKKEEKEQKPLKEGVQDMLVKHHLFSWDIDG
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtacatatacaccagctcctggggggccgttctctgctctcactccaagcatg
tggcctcaggatattttggccaaataccatcagaaagaccccaaagaccagcctgaggtt
caatacgatgagtttggcttcaaagtcaacactgaaaacgacggggagctccagtcttgc
ctgggctctgagggttccccacagcgtgaagacccccagcagcgactgcgctggcaagcc
cacctggagttcacccacaaccacacggtgggtgacctgacctgggatctgattgatccc
gttcttccccgctcggagcgcctgcgctccctggttcttggtgggattcctcacagcatg
aggccacagctgtggatgcgtctgtctggagcgctgcagaagaaaaggacttcagagatc
tcctacaaagaaatagtcaagaatagctctaatgatgacagcagtacatccaaacagata
gagaaggacttgttacggacgatgccgaccaacgcctgcttcaacagtctgaacagtgta
ggagtgccgaggttgagacggctcctgcggagcctggcgtggctctacccagacatcggg
tactgtcaggggaccggcatggtgatctcctgcctgctcctctttctggaggaggaagat
gctctgtggatgatgtgcgctctgatcgaagacctcctccctccatcctacttctcctca
actctgctaggagtccaaacagaccagcgggttcttcgccagctgattgttcagtacttg
ccgtctcttgaccacctcctccaggagcacgacatcgagttgtcgctgatcacgcttcac
tggttcctgacatcatttgctagtgttgtggacatccgtctactccttaggatctgggat
ctcctcttctatcagggctcgctggttctattccaggtcactcttggcatgctaaagatc
aaggaggaagaacttgtatcatcagagaactctgcgtccatttttaacactctgtcagac
ttgccgagtcagctacgagacggcgcgagtgttctgggagaggctatgcgactagcagga
ggattatcgcaggaaacggtagaagctcaacgacataagcacctagcatacatcctgaac
gaacaggcacagctgaacaacggaaacaacacaacactcaatctcaacaaggtggtgagg
agacagtccctgcgcagaagatccaccctcacctctctgttatttggccaggacgaggcg
gaagccctgaaatcaaagaacattaaacagaccaagttggtggcttccctccgggaggcc
atcactcgcactgcagagcatttccactgtttggacccacgtcactccagcgctgaactc
acaccagattattccatggagagccaccagcgagaccacgaaacctttctcgtggtgtcc
cgtaaccggcggagacgggccaaggcgctgctggactttgagcgccatgatgacgatgaa
ctgggcttcagaaagaatgacatcatcacgatcatctcacaaaaagatgaacactgctgg
gtcggtgagctcaatggtctcagaggttggtttccagcaaagtttgtggagatcctcgat
gaaagaagcaaagagtactctctcgcaggtgacgactctgtcactgaggcggtgacggac
ctggtgaggggcactctgtgtcccgctctgaaggccatctttctgcacggactgaaaaaa
ccttccattctgggtggaccctgtcatccatggctgtttatagaggaggctgccagtaga
gaggttgagagagactttaactctgtctactccagactggttctctgtaaaacctacagg
ctagatgaagatgggaaagtgcttactccagaggagctgttatacagagcagtgcagtcc
gtcaacatgagccacgactccgcacatgctcagatggacgtcaagtttaggtctcttatc
tgcgtcggcctgaatgagcaggtgctgcacttatggttggaggttctgtgctccagcatg
gcggctgtagaaaagtggtatcatccgtggtcgttccttcgcagtcctggatgggtgcag
atcaagtgtgagctaagggtcctatcaaagtttgcattcagtctttctcaagattgtgag
cttcctgagaagaaagaggagaaggagcagaaaccgctgaaggaaggcgtgcaggacatg
ctggtgaagcatcacctgtttagctgggacatagacggttaa
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