Oryzias melastigma (Indian medaka): 112146398
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Entry
112146398 CDS
T07439
Symbol
coil
Name
(RefSeq) coilin isoform X1
KO
K13150
coilin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112146398 (coil)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
112146398 (coil)
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Gene cluster
GFIT
Motif
Pfam:
Coilin_N
Tudor_Coilin
Motif
Other DBs
NCBI-GeneID:
112146398
NCBI-ProteinID:
XP_024127964
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Position
LG8:complement(23141927..23148943)
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AA seq
505 aa
AA seq
DB search
MAALRDSLIRLRLLFDYPPPAVAGCRMCWLLVDLNACRVVADLEGLIRDKFEFSRGSILS
LFVEDCYLPHTESILVVRDNDSVRVKVDCAAPVNGCSSCADPDRVKSRKRQRDGGEEGMQ
VEDKKKKKKKKHEENEVGRSKQETAIRTETPAGMSRKKKKRKKAETSNTPAPKPAAPPRK
IPASAPTPAENKKKTAPVPQAKTQSSSSSDSSSQETDSRKRTAARTAPPNPAAARTAPPN
PAAARTAPPNPAAARMAPPTPAAAKTPPNTKPPQKNTQPSSSSSSETDSDDSTPKSKRPG
APSVMKQTDAPPQDKGAEPADAGSEEEIQLVIRRPQLPNRHADGLWSGRGRGRGGRGGAG
QAAGWGFRGQDSNEGPSPQTNSPTDMPALLQNGAGDAPRQDYSSMPLLAAPAQVGQRIAF
KLLELTENYTPEVSEYKEAKIVSFDPTTKQIELELLHASKAPVEPGKFDLVYLNPDGSER
VEYAVSRGSKVTERWESLLEPRLIL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgctcagagacagtctgatccgcctgcggctgctcttcgattacccccctcca
gccgtggcggggtgccgcatgtgctggctgctcgtggacctgaacgcgtgccgcgtggtg
gcggacctggagggtctgatccgggacaagttcgagttcagccgcggcagcatcctcagc
ctgttcgtggaggactgctacctcccgcacacggagagcatcctcgtcgtacgcgacaac
gacagcgtcagggtgaaggtggactgtgcggctccggtgaacggctgcagcagctgcgca
gatccagacagagtcaaaagcagaaagagacagagggacgggggagaggaggggatgcag
gtagaagacaagaagaagaagaagaaaaagaaacatgaggagaacgaggtcggtagaagc
aagcaggagaccgccatcaggacggaaacgccggcagggatgagcaggaagaagaaaaag
agaaagaaggcagagacaagtaacactcctgccccaaaacctgctgccccccccagaaaa
attccggccagtgcccccacaccagcagaaaacaagaagaagacggcaccagtccctcaa
gccaaaacccagagttcctcctcctcagactccagcagccaggagaccgacagccgcaaa
agaactgctgccaggacggcgccccctaaccctgctgctgccaggacggcaccccctaac
cctgctgctgccaggacggcgccccctaaccctgctgctgccaggatggcgccccccacc
cctgctgctgccaagacgcccccaaacaccaagcccccccagaaaaacacacaaccttcc
tcttcttcgtcctcagaaacagactctgatgacagcacccccaagtccaaacgtcctgga
gctccctcagtgatgaagcagacagacgccccccctcaggacaaaggggcggagcctgcg
gacgctggcagtgaagaagagatccagctggtcatccgacggccacagctacccaacaga
catgcagacggcctctggtcagggcgaggccgcggcaggggggggcgtggaggtgcaggg
caagcggcagggtggggcttcagggggcaggacagcaacgaggggccctccccccagacc
aattccccaaccgacatgccggcgctcctccagaacggagcaggagatgcccccagacag
gactacagctccatgcccctgctggccgctcctgcacaggtggggcagaggatcgctttc
aagctgctggagctgacggagaactacacgcctgaagtgtccgagtataaggaggcgaag
attgtgagctttgacccgaccaccaaacagatcgagcttgaacttcttcacgcctctaaa
gcgcctgttgaaccgggaaagtttgacctggtttatctgaatccagacggctcagaaaga
gtggagtacgccgtctccagagggtcaaaggtgacggagcgctgggagtctctgctggaa
ccgaggctcatcctctga
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