KEGG   Oryzias melastigma (Indian medaka): 112146419
Entry
112146419         CDS       T07439                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03020  RNA polymerase
oml03420  Nucleotide excision repair
oml04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    112146419 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    112146419 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    112146419 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112146419 (polr2f)
   03400 DNA repair and recombination proteins [BR:oml03400]
    112146419 (polr2f)
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     112146419 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     112146419 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     112146419 (polr2f)
DNA repair and recombination proteins [BR:oml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      112146419 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 112146419
NCBI-ProteinID: XP_024127999
LinkDB
Position
LG8:19276363..19278587
AA seq 127 aa
MSDNEDNFDDGDFDDAEEDEGLDDLENVEDEDQENVQILPAGEGQQANQRRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtctgataacgaagacaactttgatgatggagacttcgatgacgccgaggaggacgaa
ggattagacgacctggaaaacgtggaagatgaggaccaggagaacgtacagatccttcca
gcaggagagggtcagcaggcaaaccagagaaggatcacaacaccgtacatgactaaatat
gaaagagcgagagtgctgggaacacgagccctccagatagccatgtgcgctcctgtgatg
gtggagttagagggagaaaccgaccctttacagatcgccatgaaggaactaaagagcagg
aagatccccatcatcatccgcaggtacctccccgacggcagctacgaggactggggctgc
gacgaactcatcataaccgactaa

DBGET integrated database retrieval system