Oryzias melastigma (Indian medaka): 112146469
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Entry
112146469 CDS
T07439
Symbol
slc27a1a
Name
(RefSeq) long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03320
PPAR signaling pathway
oml04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
112146469 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
112146469 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
oml01004
]
112146469 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112146469 (slc27a1a)
Lipid biosynthesis proteins [BR:
oml01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
112146469 (slc27a1a)
Transporters [BR:
oml02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
112146469 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
112146469
NCBI-ProteinID:
XP_024128074
Ensembl:
ENSOMEG00000006007
LinkDB
All DBs
Position
LG8:complement(9565984..9571344)
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AA seq
648 aa
AA seq
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MHNAASVSASLGSLGLLRLVGVSWPWSLAAGLGVYLGARSWKYFYIAAKTAKRDINGLYV
LCRVKLALWRYVHNGSNIPSIFTQVVKQHPNKPALIYEATGEVWTFTQLDEISNAVAHWA
RGQGWVSGDVVALFLESRPLQVALWLGLAKVGVEAALINFSLRCDPLLHCIGVSGSRAIV
FGAELADAMLEVNSAISQSMVRFCTGELSAEQLACLDAQPLDPVLATSPRHSPSPCVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYYAFRMRTEDIIYDCLPLYHSAGNI
LGVGQCLIHGLTVVVKRKFSASRFWDDCIKYNCSVVQYIGEICRYLLSQPVRPSEKGHKV
RLAIGNGLRPSVWEAFMERFGVTQIGEFYGATECNCSIANMDGKVGACGFNSRILPYVYP
IRLVRVNEETMELLRDSRGLCVPCRPGEPGLLVGRIDQKDPLRRFDGYANQDATKKKIAH
NVFKKNDCAYISGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGIISNLLDQTDVA
VYGVAVPGVEGKAGMAAIADASESFDCERFLKSIQRGLPSYARPVFLRTSPQVDTTGTFK
IQKTRLQREGFDPRLTSDQLYYLNSRAGRYEPIDEELYNAIVEGRIPL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcagcgagtgtatccgcctctctgggctccttggggctgctgcgtcttgtt
ggggtgtcctggccctggagtctagcagcaggccttggggtgtatctgggagcaagaagc
tggaaatatttctacattgctgcaaagactgccaagagagacatcaatggcctgtatgtt
ctgtgcagagtcaaactggctttgtggcgctacgtgcacaatggaagcaatattccttcc
attttcacccaggttgtaaaacaacacccaaacaaacctgcattgatctatgaggccaca
ggagaggtgtggaccttcacccaactagatgagatctctaacgctgttgcccactgggct
agaggtcagggatgggtctccggggatgtcgttgccctctttttggaaagcaggcctctc
caggtggctctttggctgggcttggccaaagtcggggtggaagctgcgctcattaacttc
agcctccgctgtgatcccctactgcactgcattggggtgtcagggtcccgggccattgtg
tttggagctgagcttgctgatgctatgttggaggtcaactctgccatcagccagtccatg
gtacgattttgtacaggagagcttagtgcagagcagctggcttgcttggatgctcagcct
ctagacccagttttagctacatcacctagacatagcccctcaccctgtgttccccctaaa
ggcatgaatgatcggctgttttatatctacacctctgggaccacagggctgcctaaggct
gctattgttgtacacagtcgctactacagaatcgcagcttttggatattatgcctttcgc
atgcgtactgaagacattatctatgactgtctgcccctctatcactctgcaggcaatatt
cttggagtaggacagtgtttgatccatggtctcaccgtggtcgtgaagaggaagttctct
gccagccgcttctgggatgattgcatcaaatacaactgttctgtggtgcagtacattgga
gaaatctgccgttacctcttatctcagccggtccgcccctctgagaaaggtcacaaagtt
cgtctggcaatagggaatggattgcgtcccagtgtttgggaagccttcatggagcgtttt
ggagtgacgcaaatcggcgagttctatggagcaactgagtgcaactgcagcattgctaac
atggacggcaaggtgggagcctgtggattcaacagtcgcattcttccctatgtgtacccc
atccgtctggtgagggtgaatgaggagaccatggaactgcttcgagacagccgaggcctg
tgtgtgccctgccgccctggggagccagggctcctggttggtcggattgaccagaaggac
cctttgcggcgttttgatggttatgctaaccaggatgctacaaagaagaagatcgctcac
aatgtcttcaagaaaaatgactgtgcatatatatcaggtgatgtgttggtgatggatgag
ctgggctatatgtactttcgcgaccgcagtggtgacaccttccgctggcgaggggaaaac
gtgtctaccactgaggtggagggaataatcagcaacctccttgatcagactgatgttgct
gtgtacggtgtggctgtcccaggtgtggagggcaaggctggaatggctgccattgctgat
gcttctgaaagttttgactgtgaaaggttcttaaagagcatccagcgaggacttccgtct
tacgcacgccccgtattcttacggacctctccacaagtggacaccacaggcacattcaaa
atccagaaaaccaggctgcagagggaagggttcgatcctcgtctcacgtctgaccagctc
tactacttgaacagtcgtgccggacgatacgagcccatcgatgaggagctctacaatgct
atagtggagggaagaattcctctatga
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