Oryzias melastigma (Indian medaka): 112146487
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Entry
112146487 CDS
T07439
Symbol
arhgap17b
Name
(RefSeq) rho GTPase-activating protein 17b isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112146487 (arhgap17b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112146487 (arhgap17b)
Membrane trafficking [BR:
oml04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112146487 (arhgap17b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_2
BAR_3
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
112146487
NCBI-ProteinID:
XP_024128101
Ensembl:
ENSOMEG00000012002
LinkDB
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Position
LG8:12688396..12708868
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AA seq
795 aa
AA seq
DB search
MKKQFNRVRQLANQTVGRAEKTEVLSDDLLQIEKRMEVVRLASHSVHKRLVSCMQGGVGT
DVEKRQKKLPMMALSQAMQDGGSSLGEDGLIGKMMEICGEIEKQLAVEQAQHEMQIERDV
LDPLNQLAEDEIPNILKQRKQLAKLVLDYDSAKTRYKAAKSNNSQAMGGKLDPLKDEMDE
ALNKVEICKDQLSADLYNFASKEGDYARYFVMLLEAQADYHRRSLAALEEAMPNIQKNQD
TLTEKPAFGTALEEHLKRTNRDIALPIEACVMMLLETGMREEGLFRIAAGASKLKKLKAA
LDCSTSQLEEFYCDPHAVAGALKSYLRELPEPLMTFSLYEEWVQASNFTDSDKRLQSLWT
TCSRMPETHKANFRYLVKFLARLAQDSDVNKMTPSNIAIVLGPNLLWSKTEGTLAEMAAA
TSVHVVSIIEPIIQHADWFFPEEVNFNVTGMFNKSSHPATPDPEPNLDRKRPGSTGQDGD
SHAPRKDSPALKHPEPAPRRANTVNKKQSPLTSPILQHPPVLLEEGAPPQLEPQTQAAAP
EVEQPGLSGGGSGGGALGGGVQVATVHPQVVTQLSAEESSQTREFMSTPPMQRNGSAQLV
VGMGGSKGPSPHMVRRGTKKQAPAPPKQTSLTASQSPSAQIPSSPHPTTPRRNLSKDAIQ
APSHPPPQPPPAHHPQDDPEPSPPSSPMPPDTPTHDGSLPSYPSGSLPRPSRPAPKPRVR
PSMPPPPQPPANETGNGVCGSASKIITDGGLVLKATGRTLIPQVLVEKKDSAGQESASPI
APNPEPSILAESTPL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagcagttcaaccgtgtcaggcagctcgccaaccagactgttggcagagctgag
aaaacagaggtcctgagtgatgatctccttcagattgagaagcggatggaggtggtccgc
ctggcatcacactccgtgcacaagaggctggtgtcctgcatgcagggtggggtgggcaca
gacgttgagaagagacaaaaaaagctgcctatgatggcgttgtctcaggccatgcaggat
ggaggctcttcactgggagaagatgggctgattggcaagatgatggaaatatgtggagaa
atagaaaaacagttggcagtagaacaggcgcagcacgaaatgcagattgaaagagacgtt
ctggatcctcttaatcaactggcagaggatgagattcctaatatactcaagcagaggaag
caacttgctaaactggttcttgattacgactcagcaaagacgagatacaaggcagcaaag
tccaacaacagtcaggccatgggaggaaaacttgatccactcaaagacgagatggatgag
gctcttaataaagtggagatatgcaaggaccagctctctgccgacctgtacaactttgcc
tctaaagagggagactatgcacgctattttgtaatgctgttagaggcccaggcggattat
cacaggaggtctctggcagctctggaggaagctatgccaaacatccaaaaaaaccaagac
accttgacagaaaagccagcattcggcacagctttggaagagcacctgaaacgaaccaac
cgggacatcgctctgcccatagaggcctgcgtcatgatgctgctggaaaccggcatgaga
gaggagggcctcttcaggatcgcggcgggagcttcaaagctgaagaaactgaaagcggct
ctggactgctccacctcccagctcgaggagttttactgtgatccccacgctgtcgctgga
gccctcaagtcctacctaagggagcttcctgaacctctcatgaccttcagcttgtatgag
gagtgggtacaagcgtcaaattttactgatagtgacaagaggcttcagtcgctgtggacg
acatgtagccgaatgccagagacccacaaagccaacttcagatacctggtgaagtttcta
gcaaggctggctcaggacagtgacgtgaataaaatgactcccagcaacatcgccatagtc
ctggggcccaatttgctctggtcaaagacagaagggacgctggcagagatggcggccgct
acgtctgtccacgtggtgtcaatcattgagcccatcatccaacatgcagattggttcttt
cctgaggaggtgaacttcaatgttactgggatgttcaacaagtcctctcacccagccact
ccagaccctgaacccaacctggacaggaagcggccgggcagcacggggcaggacggggac
agtcacgccccgcgtaaagacagccctgctcttaaacacccggagcccgctccacgcaga
gccaacactgtaaataagaagcagtcacccctaacctcacccatcctccaacacccacca
gtccttctggaagagggggctcctccccagctcgagccacagactcaggcggccgcccca
gaggtggagcagcctggtctgagcggcggtggttctgggggaggggctctagggggtggg
gtccaggtagccacagttcatcctcaggttgttacccagctcagcgcagaagagagcagc
caaactcgagagtttatgtcaaccccaccgatgcagagaaatggttcagcccaacttgta
gtagggatgggtgggtcaaagggacccagtcctcacatggtccgcagaggtaccaaaaag
caagccccagcccctcccaaacagacgagcctcacagcctcgcagtcccctagcgcccag
attcccagctctccacaccccaccactcctcgccgcaacctcagcaaggacgccatccaa
gccccgagccatccaccgccacaaccccctccagcccaccaccctcaggatgatccagag
ccctctccgccgtcttctccaatgcctcccgacactccgactcatgacgggtcgctccct
tcgtacccctctgggtccctgcctcggccctctcggccagctccgaagcctcgggtgcga
cccagcatgcccccgccaccgcagccccccgcgaatgagactggtaatggcgtctgtggc
tctgcctccaagatcataacagacggaggtctggtgctgaaggcgactggaagaactctc
atcccccaggtgctcgtggaaaaaaaggactctgctggtcaagagtctgcatctcccata
gctccaaatccagagccttccatactagcagaaagcactcctctgtga
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