KEGG   Oryzias melastigma (Indian medaka): 112146514
Entry
112146514         CDS       T07439                                 
Symbol
tubb4bl
Name
(RefSeq) tubulin beta-4B chain
  KO
K07375  tubulin beta
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04145  Phagosome
oml04540  Gap junction
oml04814  Motor proteins
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    112146514 (tubb4bl)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    112146514 (tubb4bl)
  09142 Cell motility
   04814 Motor proteins
    112146514 (tubb4bl)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    112146514 (tubb4bl)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112146514 (tubb4bl)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oml04812]
    112146514 (tubb4bl)
   04147 Exosome [BR:oml04147]
    112146514 (tubb4bl)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     112146514 (tubb4bl)
Cytoskeleton proteins [BR:oml04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    112146514 (tubb4bl)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   112146514 (tubb4bl)
  Exosomal proteins of colorectal cancer cells
   112146514 (tubb4bl)
  Exosomal proteins of bladder cancer cells
   112146514 (tubb4bl)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 112146514
NCBI-ProteinID: XP_024128144
Ensembl: ENSOMEG00000006742
LinkDB
Position
LG8:complement(9921095..9923731)
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRSLSVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEGEFEEEGEEEVA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgcgcgaaattgtgcatcttcaggccggccagtgcggaaaccagatcggagctaagttc
tgggaggtgatcagcgacgagcatggtattgatcccactggaacgtaccatggagacagt
gacctgcagctggacaggatcagcgtctattacaatgaggccacagggggcaagtatgtg
cctcgggccatcctagtggatctggagcccggcacaatggactcggtcaggtctggtccg
tttggacagattttcaggcctgataacttcgtctttggccagagtggagctggtaacaac
tgggctaagggccactacactgaaggggctgagctggtggactccgtcttggatgtggtg
aggaaagaggccgagagctgcgattgcctgcagggcttccagctcactcactctctgggc
gggggcaccggctctgggatgggcaccctgctcatcagtaagatccgcgaagagtacccg
gaccgcataatgaacacctttagcgtggtgccttcccccaaagtgtccgacaccgtggtg
gagccctacaacgccacgctctccgtccaccagctggtagagaacacagacgaaacctac
tgtattgataacgaagctctttacgatatctgcttccgcacacttaaactcaccaccccc
acctacggagacctcaaccacctagtgtccgccaccatgagcggggtgaccacctgcctg
cgcttccccggccagctcaacgccgatttgcgtaaactagctgtgaacatggtgcccttc
ccccgtctccacttcttcatgccagggttcgcacccctcaccagcagggggagccagcag
taccgctccttgtccgttccagagctcacccagcagatgtttgacgcaaagaacatgatg
gcagcgtgcgacccccgccatggccgatacctcaccgtggccgcggtcttcagggggcgc
atgtccatgaaggaggtggacgagcagatgctgaacgtccagaacaagaacagcagctac
ttcgtggagtggatccccaacaatgtgaagaccgccgtttgtgacatcccgccacgcggc
ctgaaaatggcagccaccttcatcggcaacagcaccgccatccaggagctgttcaagcgg
atctccgagcagttcaccgccatgttccgccgtaaggccttcctccattggtacacgggc
gaggggatggacgagatggaattcaccgaagcagagagcaacatgaatgacctcgtgtct
gagtaccagcagtaccaggacgccaccgccgaggagggcgagtttgaggaagagggcgag
gaagaagttgcataa

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