Oryzias melastigma (Indian medaka): 112146558
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Entry
112146558 CDS
T07439
Symbol
cacng1b
Name
(RefSeq) voltage-dependent calcium channel gamma-1 subunit isoform X1
KO
K04866
voltage-dependent calcium channel gamma-1
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04260
Cardiac muscle contraction
oml04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112146558 (cacng1b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112146558 (cacng1b)
04261 Adrenergic signaling in cardiomyocytes
112146558 (cacng1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112146558 (cacng1b)
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
112146558 (cacng1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
DUF805
VcrB
DUF2975
Motif
Other DBs
NCBI-GeneID:
112146558
NCBI-ProteinID:
XP_036069171
Ensembl:
ENSOMEG00000013738
LinkDB
All DBs
Position
LG8:13321608..13340472
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AA seq
244 aa
AA seq
DB search
MLKTTHIYWLMTTRQTINKQMEHFDEIIIRPFSFLCVTSRGFVGLAESFHYSCLHRHTGI
TFVQLLLLNLPRSLSFFFSSPSLSHPSVALPVFYSAAKNCSYFKHFTSGEEAEVFEVKTQ
KEYNISAAAIAIFSLFFMILGTLCVIFSFGKTRDYLLRPAGMFFAFAGLCIIISVEVMRQ
SVKRMIDSDETIWIEYYYSWSFTCACASFMLLILGGVALLLISMPHMPRNPWETCMDAEA
DTLD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaacaacacatatttattggcttatgacaacacggcaaacgataaataaacaa
atggaacattttgatgaaatcataattaggccatttagctttctctgtgtaacatccaga
gggtttgtggggttggctgagagttttcattatagctgtttgcacagacacacaggtata
acctttgtccagctcctgctgcttaatcttcctcgttctctttctttttttttctcctcg
ccttctctttcacatccttcggttgcccttcctgtcttttactctgcagcaaaaaactgt
tcctacttcaaacacttcacatcgggagaggaagcagaagtttttgaagtgaagactcag
aaagagtataacatctcggcagcagccatcgccatctttagtctgttcttcatgatcctt
ggaacgctttgtgtcatcttctcctttgggaagacgcgggactacctgctccggcctgct
gggatgttttttgccttcgcaggcctttgcatcatcatctccgttgaggtaatgcggcag
tctgtcaagagaatgattgacagcgacgagaccatttggattgaatactactactcttgg
tcattcacctgtgcctgcgcctccttcatgctgctcatcctcggcggggtcgccctgctt
cttatctccatgccacacatgcctcggaacccctgggagacctgcatggacgccgaggcg
gacactttggattag
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integrated database retrieval system
