Oryzias melastigma (Indian medaka): 112146565
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Entry
112146565 CDS
T07439
Symbol
si:ch211-106h11.1
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112146565 (si:ch211-106h11.1)
Ion channels [BR:
oml04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
112146565 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_14
LRR_8
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
112146565
NCBI-ProteinID:
XP_024128217
Ensembl:
ENSOMEG00000009801
UniProt:
A0A3B3BSH5
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Position
LG8:complement(21037850..21049745)
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AA seq
883 aa
AA seq
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MFSLSELAPPDQHQSRCKLLKPWWEVFMDYLVVLMLMTSVLACTEQLSRDRIVCIPVDPL
APASMSNHSMAPNTDVDPSPTPKSPNPQNAGPDFYSAPRGRHTHLVYQQYIYISQVCYHE
ALPLCSRFFPYMALLQSLVLVASGSFWLHFPDTSSRIEQFLSVLSKCCESPWTSQALSRT
ARQENVQELEMAERQPLLSSASSWVTRTRRSSSDSGSPLLKRSEVAPSAAPPSPCPSMLS
NSSVSSLSVGVHCPSSKEGVLPDSPRQVSLDKSDGEQARALFERVRKFRSHCESSAVIYK
VYVAQTAFKLLLALLILSYTVPLLKSLTFSHICRPEERQLVGYATFECIHVLSSLLHKLL
VAYLILLGLYTLLHLHTLRWILYSSLRHYSFQSVKDLWSLRDVPDLTNDLAFLLHMLDQY
DPVLAQRFSVFLSPVSESRLLDESLERRWGEDKLQAMTSVDADGFSRLQLVALPRLPPAL
YALGQLQILRLEFIADARFTAQVANMRSLRELHLYHCRVAVDPGALAVLQERLEVLHITF
TQASEIPSWVLSLHSLHELHLSGRLSSECSVGRSWALGSLRHLRHLRVLGIRGLLQKIPG
ELCEVASSLTRLEICNEGTRLLVLTALKRMVDLTELKLQDCQLERLPSALLSLTNLRLLD
LQHNNLSSLEELLCLAQLRHLSSLKLAYNHVSVLPASVGVLRGLELLDLSNNQLRSLPPS
LFTLHRLRRLLLAGNLLDQLPSEVKALHLLSELDLSGNRLEILPSDLCRGCSGLRSLNVA
HNSLSSLPNEIGALSQLCRLDLRCNNLEELPAELGCCSGLHGGGLLVESWLFLSLSPHTR
DLLSHSDSTSGDYSEDDSQAESDSFPYFPPSQWSFSSALESDL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctgtcggagctggcccctcccgaccagcatcagagcaggtgtaaactgctg
aagccctggtgggaggtcttcatggactacctggtggtgctgatgctgatgacgtccgtc
ctggcctgtacagagcagctctccagggacagaatcgtgtgcattcctgtggatccgctg
gcccctgctagcatgagtaatcacagcatggcaccgaacaccgacgtggaccccagtccc
actccaaaatccccaaatccacagaatgcaggtccagatttttattctgcaccacgaggg
cgacacacacacttagtctaccagcaatacatctacataagtcaggtgtgctaccacgaa
gccctgccgctatgctcccgcttcttcccctacatggccctgctgcagtccctggtcctg
gtggccagcggctctttctggctccacttccccgacacctcctcccgcatcgaacagttc
ctgtccgttttgtccaaatgctgcgagtccccctggacgtcccaggctctgtctcgcact
gcccgtcaggagaacgttcaggagctggagatggcagaacgacaacccctcctgtcctca
gcttcctcctgggtgactcggactcgacgctcgagctcagactcgggcagtccgcttttg
aagaggtcagaggtcgctccctcagctgcccctccgtcaccgtgcccatcaatgctctcc
aactccagcgtgtcctctctatctgtcggggtgcactgtccttcctctaaggagggggtc
ttgcctgacagtccaaggcaggtgagtctcgataaaagcgacggggaacaggccagggcg
ctgtttgaaagagtccgcaagtttaggtctcactgtgaaagctcagcggtcatctacaag
gtttatgttgctcagacggccttcaagctgcttctggctttgctgatcctgagctacacc
gtcccgctcctcaagtccttgactttcagccacatctgccgccctgaggagcgccagctg
gtgggatacgccaccttcgaatgcatccacgtgctgtcatcgctccttcacaagctcctg
gtggcctacttgatcctgctggggctttacactctgcttcatttacacactctcagatgg
attttgtacagctcccttcgccactattccttccagtctgtgaaagacttatggtctcta
agagacgttcctgacctgacaaacgacctggcctttctgctacacatgttagaccagtat
gatcctgtgctggcgcagcgcttctccgtgttcctgtcgcctgtcagcgagagcaggctg
ctggatgaaagcttggagaggcgctggggggaagacaagctgcaggccatgaccagcgtg
gacgcagacggcttcagccggctgcagctggtggctctgcctcgtcttcctcctgctctc
tacgcgttgggccagcttcagatcctcagactggagtttattgcagatgccaggttcact
gcacaagtggctaacatgagatcactcagggagcttcacctttaccactgcagagtggct
gtggaccccggtgcacttgcggttctccaggagcgcctggaggtcctccacatcaccttc
actcaggcttcagagattcccagctgggtcctctccctccacagcctgcatgagctccac
ctgtctggccgtttgagcagcgagtgtagcgtaggccggagctgggctctggggagtttg
cgtcatttacgccacctccgtgtgctgggcatccgaggtctgctgcagaagatcccaggc
gagctgtgtgaggtggcaagcagcttgacaagactagaaatctgtaacgaaggcaccaga
ctgctggtgctaacggctctgaagcggatggtggacctgaccgagctgaagctgcaggac
tgccagctggagcgtttgccctccgcgctgctgtctctgaccaacctgcgactgttagac
ctgcagcataacaacctgagctctctggaggagctgctctgcctggctcagctgcgccat
ctttcttccctgaagcttgcctacaatcacgtttcggtgctaccagcaagtgttggggtc
cttcgagggttagagctcctggatttgtccaacaaccaactccggagcctcccgccatca
ctctttacgctccatcgccttcgtcggctcctgttggccggcaacctccttgaccagctt
ccgtctgaggtgaaggccctgcatctgctttcagagctcgacctcagtggaaacaggctg
gagattctgccctctgacctctgccgtggctgctcggggctacgtagcctaaacgttgct
cacaattccctctcttctttgccaaacgagatcggagctctgagtcagctctgcaggttg
gacctgcgctgcaataatctggaggagcttcctgctgagttgggctgctgctcgggactt
cacggaggaggactcctggtggagagttggctattcctctctttgagtccacacaccagg
gacctgctgagtcattcagactccaccagcggtgattattcagaggacgactcccaagca
gagtctgacagttttccatacttccctccttcccagtggagcttctcttcagctctagaa
tcagacttataa
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