Oryzias melastigma (Indian medaka): 112146614
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Entry
112146614 CDS
T07439
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112146614 (ush1ga)
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112146614 (ush1ga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
RGCC
ABC2_membrane_7
Motif
Other DBs
NCBI-GeneID:
112146614
NCBI-ProteinID:
XP_024128283
Ensembl:
ENSOMEG00000008205
LinkDB
All DBs
Position
LG8:10578813..10585175
Genome browser
AA seq
472 aa
AA seq
DB search
MNDKYHRAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALRLIVSRGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAAMKNHMDCVRYLDSI
AAKQTGLNPKLVGKLKDRAFREAERRIKECVKMQKKHRKRMERKFQKETSEASASDAMSF
SSYTSSTFSQKLRNFNTTTVSVPYSQATLHATNRGKTKIQKKLERRKQGDSTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGRRNVRDMFPRDNDDAISRAISEPDLHGPDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDLGSRDAASVARSGNNVRLRSRLQP
YPSLDEDSIGSAHSLQERNMEELPWEDVDLGLDDDDEPKTNPLEVFLATQSMSEFYSIFK
REKIDLPALVLCSDHDLKSIHIPLGPRKKILDACRIRMETIEEPDCIEDTEL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaaataccaccgggcggcccgggacggctacctggacctgctgaaggaggcg
accaggaaggatctgaacgccccggacgaggatggaatgacaccgacgctatgggccgct
taccacggcaacctggaggctctgcggctcattgtttccaggggaggaaacccagacaag
tgtgacatatggggcaacacaccgcttcaccttgctgcagccaacggtcacctcaactgc
cttttcttcctggtgtcttttggggccaacatatggtgcctggacaatgactatcacaca
cctctggacatggcagccatgaagaaccacatggattgcgtgcgctacctggattccatt
gccgccaagcagacgggtctgaatcccaaactggtcggcaagcttaaggaccgcgcgttc
cgcgaagcagagaggcgaatcaaggagtgcgtgaagatgcaaaagaagcaccgaaagcgc
atggaaaggaagttccaaaaagagacgtctgaagcttctgcgtccgacgccatgagtttc
tccagttacactagcagcacttttagccagaagctacgcaacttcaacacaaccactgtc
agtgtgccatattctcaggcgactcttcatgccacaaacagagggaagacaaagatccag
aagaagcttgagaggcggaaacaaggcgatagcactttcaaaatctatgaagacgggagg
aagagtgtccgctccctttcagggctgcagctgggtaacgatgtcatgtttgtcaaacag
gggacttacgtcaacccaaaggatcgtggccgccgcaatgttcgcgatatgttcccaaga
gacaacgatgatgccatttctcgtgccattagtgagccggacctccacgggccagatgtg
gactattctgagatcagcactgactctggacacgattcccttttcaacagacccggtctg
ggcacgatggtcttcaggaggaactatgtgagcgggggaatgtttgacctcggtagtcga
gatgcagccagcgtggcccggtcaggcaataatgttcgtttacgcagtcgactgcagcca
taccccagtctagatgaagacagcattggcagcgcgcacagcctgcaggagaggaacatg
gaggagctgccttgggaggatgtggatttaggactggatgatgacgatgaacccaagaca
aacccgttggaggttttccttgccacacaaagcatgagcgagttttattccatattcaaa
agggaaaagattgacctaccagctctggtgctgtgctctgaccatgacctcaagagcatt
catatacctttaggaccaaggaaaaaaatcctagatgcctgtagaatacgaatggagacc
atagaagagccggactgcattgaggatacagaactatga
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