Oryzias melastigma (Indian medaka): 112146654
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Entry
112146654 CDS
T07439
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04136
Autophagy - other
oml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112146654 (wipi2)
04136 Autophagy - other
112146654 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112146654 (wipi2)
03029 Mitochondrial biogenesis [BR:
oml03029
]
112146654 (wipi2)
Membrane trafficking [BR:
oml04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
112146654 (wipi2)
Mitochondrial biogenesis [BR:
oml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
112146654 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
112146654
NCBI-ProteinID:
XP_024128337
Ensembl:
ENSOMEG00000004986
LinkDB
All DBs
Position
LG8:18116231..18126682
Genome browser
AA seq
427 aa
AA seq
DB search
MNLASQSGDAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECNDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKYVPAEEPTTWGGYLGKVLMASTTYLPAQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLD
SSAEAPNEILEQGSHDRPLAAQAYSAAVTKGYCEDQGAVGGAGLEDDLNDLRLEEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggctagtcagagcggggatgctggcgggagccagctccttttcgccaacttc
aaccaggacaacacatctttagctgttggcaccaaatcaggatacaagtttttctctttg
tcttctgtggacaaactggagcagatttatgaatgtaatgacacagaggatgtgtgtata
gtggagcgtctgttctccagcagccttgtggccattgtgagtctgaaggcccccaggaaa
ctgaaagtgtgtcacttcaagaagggaacagagatttgcaactactcttattccaacacc
atactggccgtcaagctcaacagacagaggctgattgtgtgtctggaggagtctctctac
attcacaacatcagagacatgaaagtgctgcataccatcagagaaactcctcccaaccct
tcagggttgtgcgccctctccatcagcaatgacaactgctacctggcgtacccaggcagc
gccacgataggagaagttcaggtgttcgacacggtcaacctgcgtgcagcaaacatgatt
ccagctcacgacagcccgttagcagctctggctttcgatgcgagcggaaccaaactggcc
acagcgtcagagaagggcacagtcatccgtgtcttctccatcccagagggacagaagctc
tttgagttccggcgaggagtcaagaggtgtgtgagcatctgttcgttagccttcagcatg
gagggcctgtacctttctgcctccagcaacacggagacggtccacattttcaagttagag
actcaaaaggagaagtatgtgccggcggaggagcccaccacgtgggggggctacttgggg
aaggtgctgatggcgtccaccacctacctgccagctcaagtgacggaaatgttcacccag
gggcgagcgttcgccacggtgcgcctgcccttctgcggccacaagaacatctgcgcctta
gctgtcatccagaagattcccaggttgttggttgcagctgctgatggttacctttatcta
tacaacctggatccacaagagggaggagagtgcacactcatgaagcagcacaggttagac
agcagtgctgaagcccccaacgaaatccttgaacaggggtcacatgaccgccccctcgcc
gctcaggcctacagtgctgctgtcactaaaggttactgcgaagaccagggcgccgtggga
ggggcggggctagaggacgacctcaacgacctgcgcctggaggaggagaacgaacagccg
ccgctcatcctggaaaccgactga
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integrated database retrieval system
