KEGG   Oryzias melastigma (Indian medaka): 112146664
Entry
112146664         CDS       T07439                                 
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
  KO
K13208  ELAV like protein 2/3/4
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oml03019]
    112146664 (elavl3)
   03041 Spliceosome [BR:oml03041]
    112146664 (elavl3)
Messenger RNA biogenesis [BR:oml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     112146664 (elavl3)
Spliceosome [BR:oml03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    112146664 (elavl3)
SSDB
Motif
Pfam: RRM_1 RRM_5 BRAP2 RRM_3 RNA_bind
Other DBs
NCBI-GeneID: 112146664
NCBI-ProteinID: XP_024128355
Ensembl: ENSOMEG00000023959
LinkDB
Position
LG8:8825906..8841591
AA seq 385 aa
MVTQIISTMETQVSNGPSGTSLPNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFG
SIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSA
SIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEA
EEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFSV
IPSLGKGPDPNNSSNTILDNLLNASYGVKSSPVLFPRFSPITIDSMTSLAGVNLTGPTGA
GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI
ASLNGYRLGDRVLQVSFKTSKQHKA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atggttactcagataatcagcaccatggaaacccaggtgtccaacggtccaagcggaacc
agcctgccaaacggccccgtcatcagtacaaacggctccacggacgacagcaaaaccaac
ttgatcgtcaactacctgcctcagaacatgacccaggaagaatttaaaagtttgtttggt
agcattggagagatcgagtcctgcaagctggtcagggacaagattacaggtcagagtctg
ggatacggctttgtaaactatgtggatccaaatgatgccgataaggccatcaacacgctt
aacggtctcaaattgcagactaaaacaatcaaggtatcatacgctcgaccgagctcagct
tcaatccgagatgccaacctttatgtgagtggacttccgaaaactatgagccagaaagac
atggaacagttattttcccagtacggtcgcatcatcacatcccgtatccttgtggaccaa
gttacagcaggcatatcacgaggagtaggcttcatccggtttgacaagcgaaatgaagca
gaggaggccatcaaaggactgaatggacagaagcctttgggcgcagccgaacccataacg
gtcaagttcgccaacaaccccagccagaagacggggcaggccttactgactcagctatac
caaaccgccgcccgccgctacacgggaccccttcaccaccagactcagcgtttcagtgtg
atcccttcacttggaaagggaccagatccaaataacagctcaaacacaatactcgacaat
ttactaaacgccagctacggagtcaagagctctccggttctcttccccagattctccccc
atcactattgacagcatgaccagcctggctggggtcaacctcaccggtccgaccggagcc
ggctggtgcatctttgtgtacaacctgtcccccgaggcggatgagagcgtcctgtggcag
ctctttgggcctttcggtgccgtcaccaatgtcaaagtcatccgcgacttcaccaccaac
aaatgtaagggcttcggcttcgtcaccatgaccaactacgacgaggccgccatggcaatc
gctagcctcaacggctaccgcctgggcgaccgcgtgctgcaggtttccttcaagaccagc
aagcagcacaaagcttga

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