Oryzias melastigma (Indian medaka): 112146664
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Entry
112146664 CDS
T07439
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112146664 (elavl3)
03041 Spliceosome [BR:
oml03041
]
112146664 (elavl3)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112146664 (elavl3)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112146664 (elavl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
112146664
NCBI-ProteinID:
XP_024128355
Ensembl:
ENSOMEG00000023959
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All DBs
Position
LG8:8825906..8841591
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AA seq
385 aa
AA seq
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MVTQIISTMETQVSNGPSGTSLPNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFG
SIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSA
SIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEA
EEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFSV
IPSLGKGPDPNNSSNTILDNLLNASYGVKSSPVLFPRFSPITIDSMTSLAGVNLTGPTGA
GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI
ASLNGYRLGDRVLQVSFKTSKQHKA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttactcagataatcagcaccatggaaacccaggtgtccaacggtccaagcggaacc
agcctgccaaacggccccgtcatcagtacaaacggctccacggacgacagcaaaaccaac
ttgatcgtcaactacctgcctcagaacatgacccaggaagaatttaaaagtttgtttggt
agcattggagagatcgagtcctgcaagctggtcagggacaagattacaggtcagagtctg
ggatacggctttgtaaactatgtggatccaaatgatgccgataaggccatcaacacgctt
aacggtctcaaattgcagactaaaacaatcaaggtatcatacgctcgaccgagctcagct
tcaatccgagatgccaacctttatgtgagtggacttccgaaaactatgagccagaaagac
atggaacagttattttcccagtacggtcgcatcatcacatcccgtatccttgtggaccaa
gttacagcaggcatatcacgaggagtaggcttcatccggtttgacaagcgaaatgaagca
gaggaggccatcaaaggactgaatggacagaagcctttgggcgcagccgaacccataacg
gtcaagttcgccaacaaccccagccagaagacggggcaggccttactgactcagctatac
caaaccgccgcccgccgctacacgggaccccttcaccaccagactcagcgtttcagtgtg
atcccttcacttggaaagggaccagatccaaataacagctcaaacacaatactcgacaat
ttactaaacgccagctacggagtcaagagctctccggttctcttccccagattctccccc
atcactattgacagcatgaccagcctggctggggtcaacctcaccggtccgaccggagcc
ggctggtgcatctttgtgtacaacctgtcccccgaggcggatgagagcgtcctgtggcag
ctctttgggcctttcggtgccgtcaccaatgtcaaagtcatccgcgacttcaccaccaac
aaatgtaagggcttcggcttcgtcaccatgaccaactacgacgaggccgccatggcaatc
gctagcctcaacggctaccgcctgggcgaccgcgtgctgcaggtttccttcaagaccagc
aagcagcacaaagcttga
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