KEGG   Oryzias melastigma (Indian medaka): 112146676
Entry
112146676         CDS       T07439                                 
Symbol
cldni
Name
(RefSeq) claudin i isoform X2
  KO
K06087  claudin
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03272  Virion - Hepatitis viruses
oml04382  Cornified envelope formation
oml04514  Cell adhesion molecule (CAM) interaction
oml04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    112146676 (cldni)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    112146676 (cldni)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    112146676 (cldni)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    112146676 (cldni)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oml03037]
    112146676 (cldni)
   04147 Exosome [BR:oml04147]
    112146676 (cldni)
Cilium and associated proteins [BR:oml03037]
 Other cilia and associated proteins
  Stereociliary proteins
   112146676 (cldni)
Exosome [BR:oml04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   112146676 (cldni)
  Exosomal proteins of colorectal cancer cells
   112146676 (cldni)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 DuoxA Clc-like
Other DBs
NCBI-GeneID: 112146676
NCBI-ProteinID: XP_024128384
Ensembl: ENSOMEG00000018782
UniProt: A0A3B3DSC5
LinkDB
Position
LG8:3308910..3311330
AA seq 211 aa
MGSSAVQMACVALGVLGLLGVVVACALPRWRVSSFIGSNIVTAQNSEEGLWMECVVQSTG
QQQCKNYDSILVLPSDLQAARAMTIISCMLATLSLLIMFCGADFTTCVQNEDAKPKINLV
GGVGLLLAGLLVIIPVSWSAHITVRDFNNPLIPATMKREMGACIYLGWAAGVLLLLAGGL
LCCFSRPRSGGSGGTAKYYSNSAPATNKNYV
NT seq 636 nt   +upstreamnt  +downstreamnt
atgggatcctctgccgtccagatggcgtgcgtggccctcggggtcctgggactgctcggc
gtggtggtggcctgcgctcttcctcgctggagagtgtcgtccttcattggctccaacatt
gtgacggctcagaactccgaggagggtctgtggatggagtgcgtggtgcagagcacgggc
cagcagcagtgcaagaactacgactccatcctggtgctgccctccgacctgcaggccgcc
cgcgccatgaccatcatcagctgcatgctggccaccctcagcctcctcatcatgttctgc
ggcgccgacttcaccacctgcgtccagaacgaggacgccaaacccaagatcaacctggtg
ggcggcgtggggctgctgctggccggcctgctggtcatcatccccgtcagctggtccgcc
cacatcaccgtcagggacttcaacaacccgctgatccccgccaccatgaagagggagatg
ggcgcctgcatctacctgggctgggccgccggcgtgctgctgctcctggccggaggtctg
ctgtgctgcttcagccggcccagatccggcggctccgggggaaccgccaagtactacagc
aacagcgcccccgccaccaacaagaactacgtgtag

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