Oryzias melastigma (Indian medaka): 112146701
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Entry
112146701 CDS
T07439
Symbol
znf598
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112146701 (znf598)
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112146701 (znf598)
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112146701 (znf598)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf_C2H2_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2_FBX41
C2H2_ASCIZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
112146701
NCBI-ProteinID:
XP_024128436
Ensembl:
ENSOMEG00000021497
UniProt:
A0A3B3DX23
LinkDB
All DBs
Position
LG8:17142065..17151053
Genome browser
AA seq
921 aa
AA seq
DB search
MDSTKDPEKTCVLCCQDVEIFALGKCDHPVCYRCSTKMRVLCDQKYCAVCREELDKVVFV
KKLETFQSLPYQNFRCEKRHDIYFGDEKIYSQFRRLMLSECPRCPEAKIFCTFEDLEQHM
RKQHELFCCKLCTKHLKIFSHERKWYNRKELARHRAHGDPDDTSHRGHPLCKFCDDRYLD
NDELLKHLRRDHYFCHFCDADGSQEYYSDYQYLSEHFRESHYLCEEGRCATEQFTHAFRS
EIDYKAHKAAAHSKNRAEARQNRQIELQFNYAPRQQRRNEGMVTGEDYEEMRQHRGGRGR
PPGGQKSWRYSREREEEDRQVEAALRASMAMRRQAERAAVQERSTPKHSREERTDRTEPE
EPKNNTAHNKTVNRPPVKTLKSSNPGDEDEFPALGATALIPSVKPAPVGGAAALKEEEFP
SLSAAAAAVTTPMTPAYCAQPRKTSSFQEEDFPALIPKVRPRKPAANTTSAWSSHTAVAP
PVSHPPPASRPAPPVSSAPSGPQLLSSSSSVSSRKKKKVGENMKAVPRHSPSLSDDESGG
MTQQEFRSVPTMLDISSLLTVKTDSNKSSTVPAPLSNTTPSADSPAPKNSKKKKQKNAAA
ASTSASTAPGVTTAVNPISVETTAQKENVPEKTRNKPNSSATAPAEMNRLANGYPDPPQS
VGKDPPLLIPVSSTEPPPDQEEEFPALMTKKPPPGFRTSFPLTASAPPSASPMPPPPPGL
AVAAPKPPPGFTGIPLNSNVVDVTPPAVNGPPKVLSSGYLVPGDFQQRNLELIQSIKKYL
NNDESQFNQFKNFSAQFRQSVISAAQYHRSCKDLLGDNFNRIFNELLVLLPDTTKQQELL
TAHADCRAVERQAGGGRKNRNRNNAWQTAPSAANTAVDLDCQVCPTCRQVLAPKDFNSHK
TLHITENEEFPSLQSISRIIS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggattcaactaaagacccagagaagacatgtgtcttgtgttgtcaagacgtcgaaatc
ttcgctttgggaaaatgtgatcacccggtttgctatcgttgctccacgaagatgagagtg
ctatgcgaccagaaatactgcgctgtgtgccgggaggagctcgacaaggtggtgtttgtg
aaaaaactggagacttttcagtctctaccttatcagaatttccgatgtgagaagagacat
gacatttattttggggatgagaagatatattcacagttcaggcgtctgatgttgtcagaa
tgcccccgctgtcctgaggccaagatcttctgtacgtttgaagatctggagcagcacatg
aggaagcagcatgagctgttttgctgcaaactctgcacaaaacaccttaagatcttttcc
cacgagcggaagtggtacaatcgcaaggagctcgctcgccacagagctcacggcgaccca
gacgacaccagccaccgaggacacccgctctgcaagttctgtgacgaccgttacctcgat
aacgacgagctgctgaagcatctgcgcagggaccattatttctgccatttctgtgatgca
gacggttctcaggaatattacagtgactatcagtatctgagcgaacacttccgagagagt
cactatctgtgtgaggaaggtcgctgcgccacagaacagtttacccacgcattccgctct
gagatcgactacaaggcccacaaggccgcagcgcacagcaagaacagagcagaggcgcga
cagaaccgccaaatcgagctgcagttcaactatgccccgagacaacaaaggaggaatgaa
ggtatggtgacaggcgaggactatgaggaaatgcggcagcatcgtggaggaagaggaagg
ccgccaggaggacagaagagctggaggtactccagagaaagggaagaggaggacaggcag
gtggaggcagctctgagagcctccatggcgatgcgaaggcaggcggagagagctgcagtg
caggagaggagcactcccaaacacagcagggaggagcggaccgacagaacagaaccagaa
gagcccaaaaacaacactgcacacaacaagacggttaacagacctccagtgaaaacattg
aaaagctccaatccaggtgatgaagacgagtttccagctttaggagctacagcattaatc
cccagtgtgaagcctgctcctgtaggaggtgctgcagccctgaaggaggaggagttcccc
agtctctctgctgctgctgctgctgtcacaaccccgatgacccccgcctactgcgcccag
cccaggaagacttcctctttccaagaggaggattttcctgctcttattcccaaagtccga
ccccgcaaacctgcagcaaacacaacttctgcgtggtccagccatacagccgtagctcca
cccgtctctcatcctccgcctgcctccagacccgcgccccccgtctcatcagcaccgtcc
ggccctcagctcctctcttcatcaagctctgtatcgtcacgcaagaaaaagaaagtcggc
gagaacatgaaagcggtgcctcgccattctccttctctctctgacgatgagagcggcggg
atgacgcagcaggagttccgctcggtgcccactatgttggatatctcctcgctcctcacc
gtcaaaaccgacagcaacaagtcttcgactgtccccgcccccctttcaaacaccactccc
agcgcagactcccctgcacccaaaaacagcaagaagaaaaagcagaagaacgcagcagct
gcctccacgtctgcgtccacagctccaggcgtgaccactgccgtaaatccgatctccgtg
gagacgaccgcgcagaaggaaaacgtcccagagaaaacccggaacaagcccaactccagc
gctacagccccggcagagatgaacagattagcaaatggatatcctgatccgcctcagagt
gtcggcaaagaccccccactgctaatcccagtctccagcacagaaccccccccagaccag
gaggaggaattcccagctctgatgacgaagaaaccacctccaggtttcaggacctccttc
ccattaacggcctccgcacctccctcagcctccccaatgcccccacctccacctggtttg
gcagtcgctgccccaaagccgcctccaggcttcacgggaatccccctcaacagcaacgtg
gtggatgtcacacctcctgcagttaacggcccgcccaaggtgttgagcagcggttacctg
gtcccaggtgacttccagcagaggaacctggagctcatccagtccattaagaaatacctc
aacaacgacgagtcccaattcaaccagttcaagaacttctcggctcagttcagacagagc
gtgatctcggcggcgcagtaccaccgcagctgtaaggacctgctcggagacaacttcaac
cgcatcttcaacgagctgctggtgctgctgcctgacaccaccaagcagcaggagctgctg
acggcccacgcagactgcagggctgtggagaggcaggcgggcggggggaggaaaaacagg
aacaggaacaatgcctggcagacggccccttctgcggctaacaccgcggtggatctggac
tgccaggtttgccccacttgcagacaggtactcgcccccaaagacttcaactcccataag
accctgcacatcacagaaaacgaggaattcccctctctgcagtcaattagtcgcatcatc
agctag
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