Oryzias melastigma (Indian medaka): 112146733
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Entry
112146733 CDS
T07439
Name
(RefSeq) xylosyltransferase 1 isoform X1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
oml00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
oml01100
Metabolic pathways
Module
oml_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
112146733
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
112146733
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
oml01003
]
112146733
Enzymes [BR:
oml01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
112146733
Glycosyltransferases [BR:
oml01003
]
O-Glycan biosynthesis
Glycosaminoglycan
112146733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
112146733
NCBI-ProteinID:
XP_024128477
Ensembl:
ENSOMEG00000015218
UniProt:
A0A3B3DN29
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All DBs
Position
LG8:complement(1645079..1669344)
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AA seq
890 aa
AA seq
DB search
MSPCARRLARRPRSALLLLAAVAVLLVQTLIVWNFSSLDSAGGDGGSRSREKRGERAAGL
HKDHREGGGGAARHRLQADAPLSHRPKEKLRPDSNSENSVPKDFDSVDGNSNLAARSQHL
RKRKLEKAQSMMGNDIFKHVQPKGRNHNHTRKSQPPLPSFAAPAQGSNQPARPPPPPPGL
EAKRQCEISGKEAISALSRAKSRECRQQIVEAFCRHKDKALMPEKVPRLCPSEGKPLMTV
QWDEGVASEGAPPTRIAFVLVVHGRASRQLQRLFKAIYHTSHYYYIHVDQRSDFLHREVL
SLARQYSNVRVTPWRMTTIWGGASLLTMYLRSMEDLLRMSDWSWDFFINLSAADFPIRTN
QQLVGFLSKHHGKNFIKSHGRDNTRFIRKQGLDRLFLECDAHMWRLGDRKIPEGIAVDGG
SDWFLLSRSFLDYVVNSGDELVSSMKRFYAYTLLPAESFFHTVLENSAHCETMVDNNLRL
TNWNRKLGCKCQYKHIVDWCGCSPNDFKPSDLPRFQQTSRPTFFARKFEASVSQEVINQL
DALLFGAFPPGTPGLQSYWENVYEQETDGLSSLPDSRLSHYHAFARMGLAHAAGSPQGRP
NNHSCRYMAVSHPVSVHLYFLSDRFRGYLVRHVATNRASTQMETLETWVTPKDHFALASP
PHANNRLQHIQVGSDWDPKERIFRNWGGLLGPEDEPVAVQRWSRSQNNLTATIVWIDPTN
VIAATYDILVDASAEVTHYRPPLTSPLRPGVWTLRVLQRWSLLGQTRFIVAPLEFHRQQP
IQREDAQRLHGGPAKNSYMEQSFHGLNPVLQLPVSLVDVEAAEANAGLTGAPLRLWVDGL
LGGHWSASDVCSLAPSACSFTKLCRTATWSSAGPDPKSELTPPRENGRIR
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgtgcgcccgcaggctggcccggcggccgcgctccgcgctgctgctgctcgcc
gccgtcgccgtgctgctggtccagaccctcatcgtgtggaacttcagcagcctggactcc
gccggcggggatgggggctccaggagccgggagaagagaggggagcgcgccgcggggctc
cacaaagaccaccgggagggagggggcggcgcggcgcggcaccggctgcaggcggacgct
cctctctctcatcggcccaaagagaaactccgacccgacagcaacagcgagaactccgtc
cctaaagacttcgacagcgtcgacggcaacagcaacctggcggcgcgatcacagcacctg
cggaaacgtaagctggagaaagcccagagcatgatgggaaatgacatcttcaagcacgtc
cagcccaaaggccggaaccacaaccacacccgaaagagccagcctccactgccgagcttt
gcagcgccggctcaggggtccaatcagccggcgaggcccccaccgccgccacccgggctg
gaggcgaagaggcagtgcgagatcagcgggaaggaggccatctcagctctgtccagagcc
aaaagccgggagtgccggcagcagatcgtggaggcgttctgtcggcacaaagacaaggcg
ctgatgcctgagaaggtgccccgcctctgcccctcagaaggtaaacccctcatgaccgtg
cagtgggacgaaggcgtggcctctgagggggctccgcccacacgcatcgccttcgtcctg
gtcgtccacggccgagcctctcgccagctccagcggctcttcaaagccatctaccacacg
tcgcactactactacatccacgtggaccagaggtccgacttcctccacagagaagttctg
tctctggcccgtcagtattcaaacgtccgtgtgacgccctggaggatgaccaccatctgg
gggggcgccagcctgctgaccatgtacctacgcagcatggaggacctgctgcgcatgtcc
gactggtcctgggacttcttcatcaacctcagcgctgctgacttccccatcaggaccaac
cagcagctggtgggctttctgtctaaacaccacggcaagaacttcatcaaatctcacggc
agagacaacacgcgcttcatccggaaacagggtctggaccgactcttcttggagtgcgac
gcccacatgtggcgcctgggagaccggaagatcccagagggcatcgccgtggacgggggc
tctgattggttcctgctcagccgctccttcttggattacgtggtgaactccggggacgaa
ctggtcagcagcatgaagcgcttctacgcctacacgctgctccccgccgagtcgttcttc
cacacggtgctggagaacagcgctcactgcgagaccatggtggacaacaacctgaggctg
accaactggaaccgcaagctggggtgcaagtgtcagtacaagcacatcgtggactggtgc
ggctgctcgcccaacgacttcaagccgtccgacctgccgcgcttccagcagacgtccagg
cccaccttcttcgcccgaaagtttgaggccagcgtcagccaggaggtcatcaaccagctg
gacgccctcctgttcggggcgttcccccccgggactccgggcctgcagtcctactgggag
aacgtctacgagcaggaaacggacggcctgtccagcctgccggactccaggctcagtcac
taccacgccttcgcccgtatggggctggcccacgccgccggctcgccgcagggccgtccc
aacaaccacagctgcaggtacatggccgtgagccacccggtgtcggttcacctctacttc
ctgtccgaccgattccgtggttacctggtccgccacgtggccacgaaccgagcctcgacc
cagatggagaccctggagacctgggtgactcctaaagaccacttcgctctggccagcccg
cctcacgccaacaaccggctgcagcacatccaggttggttccgactgggatccaaaggag
cggatcttcaggaactgggggggtctgctgggccctgaagacgagccggtggccgtgcag
cgctggagccggagccagaacaacctgacggccaccatcgtgtggatcgaccccaccaac
gtcatcgccgccacctacgacatcctggtggacgcgtccgccgaggtcacgcactaccgg
ccgccgctcacctcgcctctgcggcccggagtctggaccctgagggttctgcagcgctgg
agcctgctgggtcagacccgcttcatcgtcgctcctctggagttccacagacagcagccc
atccagagagaagacgcccagcgtctgcacggcggcccggccaagaactcctacatggag
cagagcttccacggcctgaacccggtgctgcagctgcccgtcagcctggtggacgtggag
gcggcggaggccaacgccggcctgacgggggcgccgctccgcctctgggtggatggactc
ctggggggccactggtccgcctcagacgtctgttcgttagcccccagcgcctgctcgttc
actaaactctgcaggacggcgacctggagctccgccggcccggaccccaaatctgaactg
accccccccagagagaacgggcggatcaggtag
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