Oryzias melastigma (Indian medaka): 112146830
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Entry
112146830 CDS
T07439
Symbol
samd1a
Name
(RefSeq) sterile alpha motif domain containing 1a isoform X1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112146830 (samd1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
112146830 (samd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
BUD22
Motif
Other DBs
NCBI-GeneID:
112146830
NCBI-ProteinID:
XP_024128614
Ensembl:
ENSOMEG00000006638
UniProt:
A0A3B3D7P1
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All DBs
Position
LG8:complement(9878380..9888683)
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AA seq
412 aa
AA seq
DB search
MSEPKYREWILDTIDSLRSRKARPDLERICRMVRRRHGSEPDRTCAELEKLIQEQTVLKV
NYKGSISYRNAAKVQRRSRKKDDASLTTAARRSAVEEASHSDLSNGDSAFGTVDQDDEDL
EADTSMAMDTDSNPDEEGAEESQDGQDKSSPSRTPEEPPVHRAPAQAASAPCSPSGTRPG
PACSSGQDYATFQKASQRPNSLPPSSPRALAHNDWAYDPAACPVERQHPGMQRDKAEMKP
VVNAGTTTPCDLNNVKKNDGDKLEDGGLSSDQLVPDSAARPDEIRTVSDGRPQTLSLPSE
NCTFKKIDISLKPAEDGLLNGTGEEISLKKEKMSQNLLQWTVADVASYFSAAGFPEQAVA
FRTQEIDGKSLLLMQRSDVLTGLSIRLGPALKIYERHVKVLQRTHFLECENI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacccaagtaccgcgagtggattctggacactatcgactcgctgcggtctcgg
aaagcccggccggacttggaaaggatttgccgaatggtccggagacgacacgggtccgag
cctgaccgaacctgtgcagaactagagaaactaatccaggaacaaaccgtgctgaaagtt
aactacaagggctctatttcctaccgaaacgccgctaaggtccagcggcggagcagaaaa
aaggacgatgcttcgttaacaacggctgcgaggaggagcgcggtggaagaagccagtcat
tccgacctgagcaacggggacagcgctttcggtaccgtggaccaggacgacgaggatttg
gaggcggacacttccatggctatggacacagacagtaatccagatgaggagggggccgag
gagagccaggacggccaagacaaatcctctcccagccgcactcccgaggagccccccgtg
caccgcgcgcccgcgcaggcggcgtctgccccctgctccccctccggcacccgccctggc
cccgcgtgcagctcgggtcaggactatgccactttccagaaggccagccagaggcccaac
tccttgcccccctccagccccagggccctcgctcacaatgactgggcttatgatcctgca
gcgtgcccagtggagcgccagcacccaggaatgcagagagacaaagcagaaatgaagcca
gtggtcaacgccggaactaccaccccctgtgacttaaacaacgtcaagaaaaacgacgga
gacaagttagaggacggcgggctctcgtccgaccagctggtaccggactctgcagcgaga
ccggatgagatcagaaccgtctctgatggaagaccacaaacattatctctgccgtccgag
aactgcacatttaagaagatagacatatccctcaaaccagctgaagatggtcttctaaac
ggcacaggcgaggaaatctcgttgaaaaaggagaagatgagccagaacttgttgcagtgg
actgtagcagatgtggccagttacttctcagctgcaggatttccggagcaggccgtggcc
ttccgaacacaggaaattgacgggaagtccctcctcctgatgcagcgcagcgacgtgctg
accggcctgtccatccgactcggccccgccctcaaaatctacgagcgacacgtgaaggtg
ttgcagaggacccactttctggaatgtgagaacatctga
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