Oryzias melastigma (Indian medaka): 112146874
Help
Entry
112146874 CDS
T07439
Name
(RefSeq) zinc-activated ligand-gated ion channel
KO
K04819
5-hydroxytryptamine receptor 3
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
112146874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112146874
Ion channels [BR:
oml04040
]
Ligand-gated channels
Serotonin (5-HT3)
112146874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF8148
Motif
Other DBs
NCBI-GeneID:
112146874
NCBI-ProteinID:
XP_024128686
Ensembl:
ENSOMEG00000008148
LinkDB
All DBs
Position
LG8:10567156..10570532
Genome browser
AA seq
417 aa
AA seq
DB search
MKSASLFVAFLILVLGSRNVDLTCTSRRCLAEMLIARNMLSMPQDENCSLLIYVPFIEYQ
TLSVNTRTLRLNSRLRAMIKWTDPQLAWDTSEYPYDAVMLPVDKIWTPMLQVTNGISTSM
EHDSNDLLVYSNGTVDHKVHINAEINCEVNLFNYPFAGDECPVAIETLSNGDCITSLVLD
QVRSIDGSTGDWQTNYAYLKKKREDRNFIAVGLKISWSSPLMTLLLPTILIVLADFVSFA
LPLDGGGRNGFKVTLVLSFVMFLNLLNSQLPGDGECSPIIRIHFCVCLVLLVLSMLVSMV
LTRLAHDGSLIFFHLLKQPAPQSSEDIEEKDEEELKADIHIAQLDGPEDVQMLRKVVKFL
QGLEDKQSQKERNHMFADKLDKIFFLFYLVFGIIYLVIMFGIMAAYRCTVDHFNFWY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgcatccttgtttgtggcttttctgatcctcgttttaggaagcaggaacgtt
gatttgacgtgcacaagtcgcagatgtttggcagaaatgctgatcgccaggaacatgcta
tccatgcctcaggatgaaaactgctctttgctaatctacgtaccgttcatcgagtaccaa
actctgtctgttaacaccagaactctccgtctaaacagccgactgagagccatgatcaaa
tggacggatcctcagctggcttgggacacttctgagtacccgtacgatgcagtgatgttg
ccggttgataaaatctggacacccatgcttcaagtcacaaatggaatatcgaccagcatg
gagcacgactccaatgacctgctggtgtacagcaacggcacagtggatcataaggtgcat
attaatgcagagatcaactgtgaagtcaatctgttcaactacccctttgctggggatgag
tgtcccgttgccattgaaactctttcaaatggagattgcattacatccttggtactggat
caggtcaggtcaatcgacggatcaactggagactggcagacgaattatgcatatctgaag
aaaaaacgggaggaccgtaattttattgcagtgggtttgaaaatcagctggtccagccca
ttaatgacactactgttgcccactattctgatcgtcctggctgattttgtcagcttcgcc
ctgccgctggacggaggtggacgcaacgggtttaaggtcactctggtgctcagcttcgtc
atgttcctcaacctgctcaacagtcagctccccggagatggggagtgtagccccatcata
cgaatccacttttgcgtttgcttggtcctactggtgctgagcatgctggtgtccatggtg
ctgactcgtctggcccatgacgggagcctcattttcttccacctgttgaagcaaccagca
ccacaaagctcagaagacatcgaggagaaggatgaggaagagctgaaagcagacatccac
atcgctcagctggacggccctgaagacgttcagatgctcagaaaggtggtgaagttcctt
cagggtcttgaggacaagcagagccagaaggagcgtaaccacatgtttgcagacaaactg
gacaaaatcttctttttgttttatttggtttttgggataatctatcttgttattatgttt
ggaataatggcagcttatagatgcaccgtggatcattttaatttctggtactaa
DBGET
integrated database retrieval system
