Oryzias melastigma (Indian medaka): 112146961
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Entry
112146961 CDS
T07439
Symbol
svilc
Name
(RefSeq) supervillin isoform X1
KO
K10369
supervillin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oml04812
]
112146961 (svilc)
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Gelsolin / villin
112146961 (svilc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Gelsolin
VHP
DUF7904
MPK1_gelsolin_C
Motif
Other DBs
NCBI-GeneID:
112146961
NCBI-ProteinID:
XP_024128822
LinkDB
All DBs
Position
LG8:complement(4977981..4999766)
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AA seq
1554 aa
AA seq
DB search
MDPMEDAVLEPRAERIARYKAERRRELAERFNNLDDLPTKWVRRNGQEAPESEPEMMNSD
GLGDKADSRGQEVTNGVETDAPAESNNLRGQGNQQDPATPLSGHSAPQLHTRVSVGQLRS
ALLQQTDGGAQPDRASVDGGRAVSSLDLATTPGAEGGRRRTQRYLPGGTSGSRKTNERFR
TQPITAIEVEQSSGFLDVETKDNKEAEEQTDDRAKMSVAAKMSLFKEMEKSAAPETSVLL
KPRSSSSSHERRARRSSDHRFLTQPITCEEMVAISTSPPADAQTDSVDDGDESCKMSMSE
KLALFNKLALPGKLGAGPADGPPERRRQKGARYRTQPITVEEVSMLQKGPVQLPAFSLSA
HLSDRQQVSSVNLKPSEVRLSQPRPGLTESQSSAADPCLKGILKKSRSAGSEWSRTDQNG
GGGGDADMLGRMEGTERREGSAPSQRRKREGVELGSAAPWRQRVRTRRETIACTPMRGSP
CGSQEQEETGSPAGLGLEQTRGAQEVEEKMDEEETSKRSVQVILSDNTNNEASQSQEARG
VESWEPVFASVYSVVSPQYIMCFNQTNLSFEAQEVSSPLPAQPQWRQKAKEQDVTLHTVE
AAEPETQQEAEDDLGVAASETRDEAFPAEAGTCTASRSDSLTETPRNEEASAGEPAASDG
SFSVDKSLPPTCGPTPCGGIGATESEQDLGVLCQSSTPILSSAVAEHRRAVRPSRRTQGS
RNPLRALAARQDVRQDFMGSAAAEEQDQAEKKSKNHSSEDPVTPEDIVSPSEAPLSFPPF
SSRMLIHIKGRRHVQVRLVEPSVRSLNSGDCFLLVTPQHCILWSGEFANKQERAKGSELA
SFIQSRRDLGCEASHVVHLEEGLNSDSSEADDFWSLLGGRTNYRGAGVSEEDELFELGVV
ESNCVYSLVEDRLVPHEEAWASIPNTSLLRSTEAIVFDFGSEVYLWHGRDVSPSRRDIAL
QLTQQVWGGEYDYSNCRVNPLDPTRCNPSIHLKGASRPSWALLAVVAEGEETALFKEKFV
DSRAQEDDPAGAETPLNLTQSPEPASSGVLCPCDAKALVSGESLEAGGSVCTLLEGLDVQ
RGCGVITLEEGHQMELKTVAVDTWHVQEFDDSEIPVESGGQLHEGDSYVVRWTYSVTAVD
NGSDESEEASGSKEKTAFFLWRGRHSRVSGRDTAAFLSIGLKNHEESQVVVPQGEEPPCF
LQLFQGGLVIHKGKREETSTNAEWRLFCVRGELPQEGSLLEVDCSCTSLRSRGSAVLLNS
QQGELYLWIGCKAHSNTREVSKRTVEQLTKTCPPELGLHKSSHINVHLVEEGSEPADFWA
ALGPMDRKAYDCMLQDPGKYNFTPRLFHLTTSSGRFQAKELLSRSRLPGLVMAMPFNQES
LYSVPQPALFLLDNRLEVYLWQRGQPEQTESSASAWSLWHNERKCAMQTALQYCKEMNPR
RPPYAYLILEGLEPLTFTNVFPRWERSFGPQTQGDVGQVKLTLVQDALAQLMKTQYPLEE
LMKSPLPEGVDPQQLEVYLSDQDFQTILEMKRDEYASLPSWKQTDLKKSKGLFC
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatggaggacgccgtcctggagcccagagcagagcggatcgcccgctacaag
gccgagaggagacgagagctggccgagcgcttcaacaacctggacgaccttcccaccaag
tgggtgaggagaaacgggcaggaggcaccggaatcggagcccgagatgatgaactcggac
ggcctcggagacaaagcggatagcagaggtcaggaggttaccaatggagtggagacggat
gctcccgcagagtccaacaacctgaggggtcagggtaaccagcaggaccctgccaccccg
ctgagtgggcacagcgcccctcagctccacactcgggtgtcggtgggccagctgaggagc
gccctcctgcagcagacggacggtggagcccagcctgacagagccagcgttgacggcggg
cgagccgtgtcgtctctggatctggccacgacgccgggtgctgaggggggccggcggcgc
acccagcgctacctccccggcgggacgagcggaagccgcaagaccaacgagcgcttcagg
acgcagccgatcaccgccatcgaggtggagcagagcagcgggtttctggatgtggagaca
aaggacaacaaagaagctgaggagcagaccgatgacagagccaaaatgagcgtggcggcc
aagatgtctttgtttaaagagatggagaagtcggcggcaccggagacctcggtcctcctg
aagcctcgctcatcgagctccagtcatgaacgcagggcgcgccgcagcagcgaccatcgc
ttcctcactcagccaatcacctgtgaagaaatggtggctataagcacttctccaccggct
gacgcccagacggacagcgttgatgacggagacgagagctgcaagatgagcatgagcgag
aaactggccctcttcaacaagctggccctgcctgggaagctgggggccggtcccgccgac
gggcccccagagagacggaggcagaagggagctcgataccgaacgcagcccatcacggtg
gaggaggtcagcatgctccagaaaggccccgttcagcttcccgccttcagtctgtccgct
cacctgtccgacagacagcaggtctcgtctgtcaacctgaaacccagcgaggtgcgcctc
tcccagcccagacccggcctgaccgagtcgcagagctccgccgctgacccctgtctgaaa
ggaatcctgaagaagagccgctctgcaggctcagagtggagccggacggatcagaacgga
ggaggcggtggagatgcagacatgctggggaggatggaaggaactgagagacgggaaggg
tctgcaccttcacagagacgcaaaagggaaggcgtggaattagggtctgctgccccctgg
aggcaaagagtccgaacgaggagggaaacgattgcctgtacacccatgagagggagtcca
tgtgggagccaagagcaggaggagaccggctctcctgcaggactcggcttagagcagacc
agaggagcccaggaagtggaggagaaaatggatgaagaagaaaccagcaaaagaagtgtt
caggtcatcctgtcagataacacgaataatgaagcaagccaaagtcaggaagctcgtggc
gttgagagctgggagcctgtctttgcctctgtctattctgtcgttagtcctcagtatatc
atgtgtttcaatcagaccaacctttcctttgaggcgcaggaagtcagctctcctcttcct
gctcagcctcagtggagacagaaagctaaagaacaggatgtgacgcttcacacggtcgaa
gctgcagaaccagaaacccagcaggaagctgaagacgatctgggagttgcggcttcagaa
acgcgtgatgaggcgtttcctgcagaggctggaacgtgcacagcttcacggagcgactcg
ctcacagaaactcccaggaatgaagaagcgtctgcaggtgaacccgccgcctcggacggt
tctttcagtgtcgataagtcacttcctcccacctgcgggcccacgccgtgtggcggcatc
ggcgccacagagagcgagcaggacctgggcgtcctctgtcagagcagcacacccatactt
tcctcagcggtggcggagcacaggcgggctgtgcggccgtcccgccggactcaaggttcc
aggaaccctctgagggctctggcagcccgacaggacgtcaggcaggacttcatgggcagc
gcagcagcggaggagcaggatcaggcagaaaagaagagcaagaaccactcctcagaagat
cctgtcaccccagaggacatcgtctccccctctgaggcaccactgtcttttcctcccttc
agcagccgaatgttgatccacattaaaggtaggcggcatgtgcaggtgcgcctggtggag
ccgtcagtgcgatcactgaacagcggagactgcttcctgctggtcacgccgcagcattgc
atcctgtggagcggagagttcgccaacaagcaggagagagccaagggttctgagctggca
tcgttcatccagagtcggagagatcttggttgtgaggcgtcgcatgtcgtccatctcgaa
gaggggctgaactctgacagcagtgaggccgacgacttctggagtcttctgggaggaaga
acaaactacagaggggccggtgtttctgaggaggacgagctctttgagcttggagttgtg
gagtcaaattgtgtgtacagcctggtggaggaccggctggttcctcacgaggaggcctgg
gcctccatccccaacacctccctgctgcgctccactgaggctatagtgtttgattttggc
agtgaggtctacctgtggcacggtcgggacgtttccccatccaggagggacatcgctctg
cagctgactcagcaagtgtggggcggggagtacgactacagcaactgtcgggtcaacccg
ctggaccccactcgatgcaaccccagcattcacctgaagggagccagccggcccagctgg
gctctgctcgccgtggtcgccgagggcgaggagaccgctctgtttaaggagaagtttgtg
gacagcagagcgcaggaggacgatccagccggggcggagactccacttaatctcacacag
tcgccagagccggcgtcctcgggcgtcctgtgtccctgcgatgccaaagcgctggtgtcc
ggagagtcccttgaagctggaggttctgtctgcacgctgctggaaggcctggatgtccag
agaggttgtggcgtcatcactctggaagaaggccatcagatggagctgaaaactgttgcc
gtggacacgtggcacgtccaggagtttgacgacagcgagatcccggtggagagcggcggt
cagctccatgagggagattcctacgtggtccgctggacctacagcgtcaccgccgtggat
aatggctccgatgagagcgaggaggcttcgggatccaaagagaaaaccgccttcttcttg
tggcgaggacggcattccagagtgagcggacgggacacggccgctttcctgtccatcgga
ctcaagaaccacgaggagtcccaggtggttgtacctcagggtgaggagcctccctgtttc
ctgcaacttttccagggaggtctggttattcacaagggaaagagagaggaaacgtccaca
aatgcagagtggcgtctgttctgtgtgcgaggggagctcccacaggaaggttcactcctg
gaggtggactgctcctgcaccagtctgagatccaggggctctgctgtgctgctgaacagc
cagcagggggagctgtatctctggattggttgtaaagctcacagcaacaccagagaagtc
agcaagagaactgtggagcagctcactaaaacgtgtcctccagagcttggtcttcacaag
agcagccacatcaatgtgcacttagtggaagaaggttcagagcctgcagacttctgggcc
gctctgggaccgatggacaggaaggcctatgactgcatgctgcaagatccaggaaagtat
aacttcacacctcgtctcttccatctgacgacctcgtcggggagatttcaggctaaggag
ctcctgagccgctcacggctgccggggctcgtgatggcgatgcccttcaaccaggagagc
ctttactctgtaccacagccagccttgttcctgctcgataaccgactggaggtgtacttg
tggcagagaggtcagccggagcagacggagagttccgcttcggcctggagcctctggcat
aatgagagaaaatgtgccatgcagacggcgctgcaatactgcaaagagatgaaccctaga
aggcccccgtatgcgtaccttatactggaggggttggaacctctcacctttaccaacgtg
ttcccccgctgggagaggagctttggacctcagacacagggtgacgtgggccaagtgaag
ctgaccttggtgcaggacgccctggcccagctcatgaagacgcagtaccctttggaggag
ctgatgaagagtcctctacctgagggagtggatcctcagcagctggaggtctacctgtca
gatcaggacttccagacaatcttggaaatgaaaagagatgaatatgcctccctcccgagc
tggaagcaaacggatctgaagaagagcaaagggctgttctgttag
DBGET
integrated database retrieval system