Oryzias melastigma (Indian medaka): 112146970
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Entry
112146970 CDS
T07439
Symbol
si:dkey-208k4.2
Name
(RefSeq) P43 5S RNA-binding protein
KO
K09191
general transcription factor IIIA
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112146970 (si:dkey-208k4.2)
03021 Transcription machinery [BR:
oml03021
]
112146970 (si:dkey-208k4.2)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112146970 (si:dkey-208k4.2)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
112146970 (si:dkey-208k4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
TFIIIA_zf-C2H2
Zap1_zf1
zf-C2H2_6
zf-C2H2_jaz
zf-C2H2_8
zf-met
Ogr_Delta
Motif
Other DBs
NCBI-GeneID:
112146970
NCBI-ProteinID:
XP_024128843
LinkDB
All DBs
Position
LG8:complement(5945787..5949040)
Genome browser
AA seq
368 aa
AA seq
DB search
MMKAEKGVGAGPQQVFSCAHAGCGASFPREWKLKQHETAHTGERPCACPAPGCGRRFKRT
SHLKTHMLQHKGVKGFPCKFANCAKSFFNAQRLKKHQKSAHGDHKFKCNQPKCSLTFKKR
RLLKLHLKEHDVLPNFKCSNTGCMMTFDSHIARKAHEKKHAGYRCPEKDCQVVEHTWSKL
QKHLAKRPVSFTCGVCKKTYNKAGALRRHKRTHASHKPVLLCPRPNCQAYFTTTFNLQHH
IRKVHLQLLKYKCSFPDCPRTFAMRESMHRHLVRHDPSGIISKKRPREKKSWQKRLNGHN
QPSVEENLQRLFALRMRISRRAKVEANLAGLFNERKIPHFVDPEVNLRDLFGIRPPRLPE
SPTVAPVN
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaggctgagaaaggtgttggagctggaccgcagcaggtgttcagctgcgcccac
gccggctgtggagccagcttcccgagggagtggaaactaaagcagcacgaaacggcgcac
accggggagcgtccgtgcgcgtgtccagcacccgggtgtggtcgccgtttcaagagaaca
tcccatctgaagacgcacatgctccaacacaaaggagtcaaaggcttcccatgcaagttt
gcgaattgcgcaaagagtttctttaatgcgcaaagactgaagaaacaccagaaaagcgcg
cacggggaccacaaattcaagtgtaatcaacccaagtgctccttgaccttcaagaagcgc
cgactgttgaagctgcatttaaaggagcacgatgtgcttccgaacttcaaatgttccaac
actggatgcatgatgacatttgactctcacattgcacgaaaagcccatgagaagaagcat
gcaggttatcgttgccctgagaaagactgccaggttgttgaacacacctggagcaaactc
cagaaacatctggccaaacgcccagtctcctttacctgtggagtctgcaagaagacgtac
aacaaagctggtgctctgcggagacacaaacggacccatgcttcccacaaacccgtgctg
ctgtgtccaagacccaactgccaggcctacttcaccacgacctttaacctgcagcatcac
atccgcaaagtgcacctccagctccttaaatataaatgcagcttccccgactgtccgcgc
acatttgcgatgcgggagagcatgcaccgacacctggttcgccacgatccaagtggcatc
atttcaaagaaacgtcccagggagaagaaatcctggcagaagcgtctgaacggacacaac
cagccgtccgtggaggaaaacctgcagcggctcttcgcgctgcgcatgcgcatctccaga
cgcgctaaagtggaagccaacctcgcgggtctcttcaacgagcgcaagatcccccatttc
gtcgaccctgaggtcaacctgcgtgacctgtttggcatcagaccccccagacttccagaa
agcccgacggtggcaccagttaactga
DBGET
integrated database retrieval system
