Oryzias melastigma (Indian medaka): 112147063
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Entry
112147063 CDS
T07439
Symbol
arhgap21b
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112147063 (arhgap21b)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Others
Others
112147063 (arhgap21b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112147063 (arhgap21b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH_9
PH
PDZ
PDZ_2
PH_11
Adeno_L433K_22K
Gp53-like_C
Motif
Other DBs
NCBI-GeneID:
112147063
NCBI-ProteinID:
XP_024128934
Ensembl:
ENSOMEG00000003582
UniProt:
A0A3B3BAR0
LinkDB
All DBs
Position
LG17:complement(9171515..9212560)
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AA seq
1714 aa
AA seq
DB search
MMAFRWGPPCEDEEKRARFSYCENDYGAWRTLADSFAAEEESFAWQRPKTLLLRRTSQGF
GFTLRHFIVYPPESSVHGFQVEDQGRRGRQQSRLDAMDTIFVKQVKEGGPAHEAGLCTGD
RIVKVNGASIIGKAYGEVISLIQDSGDFLELCVMPKDEDILQLAYSQDAYIRGHSSYSGN
ASHIPDPPPVCYPRIDCKPTGMAQATDLTGQVGRGPMPAPDHGYRKEITVPPSPPRQQYP
KSQTAVCMLNNNVRTVVVPPIPAQMGHMGPAHRMDFTGPAFVRGRPGSLAQYPHPQKADV
YPGGPGMVLMGAQVPQYPGNHQNIDWRTYQTYREYIDNKGIHSHGSRTIQDRLDSLRTAS
QGPFPTPHHIARGDWAPKDIRRRSTSHERSYHGPPLHFQVAPRSVSQDRMLNAEKISRAS
DWPPRSASQDGLVHKARVRTTDYSDPAELAWSNERKVGPGRADQGTRPTRQSMPRHAMLY
RPSAGFGGAMRVPTNPSFYHKGPNFNQTRSTPMLPERTVHYGNSKSVDQSFSDQRVAVSL
GQMSQQGQSRMRAETIHTTETRRDEALRGVRSASCSAPKELPQRPVILNVSQPDPQNEIN
GQSPSEVEVVLRQKPPSGKNPSPLRHHSYILAVNDEGADVMACYLPNDARREMQMRRLEE
HHTSCSSNLDESLDSIPFIDEPVSPSVDREATHIPPSAVISVAPSIATAPSSQGSPCLPI
RRQLSHDQESMRSALLDSDSASKTERSKSYDEGLDSYPEEGRGRSSSKQISGFRGLRKTL
DGHKSSGDAGSRRESSSCIFPDSSKEGLLNFRQLCTEKNKRVSGGLRSWKQIYAVLQGQT
LTLYKDRKDALSEEDPLRVGIKACLIDISYCDTRRKNVLRLTTTDCKYLFQADGKEEMLS
WIKVIQDSSNPDEENAAVTSQDLINRKIKEYSMSSSSSRSEPSPKTARQSLSIRQALLGG
KNDGRVLSPHSPKMGEERRTLKDEASPPRDRGAWKIGIPGIMRKPFEKKTPAGITFEIRL
EDCPPSKSNEFVPLIVELCCQVVEERGLEFTGIYRVPGKKAAISSMQEELNTKGMADIDL
QEEKWQDLSVISSLLKLFFRKLPEPLFTNDKYDEFIEASKTEDPVERLKKLKRLVYELPK
HHFETLKFLCAHLKRVSDNCEKNKMEPRNLAIMFGPTLVRTSEDDMTNMVNHMPDQCKIV
ENLIQQYDWFFTEENEEDPITTADQEGTVQSQPVPNIDHLLPNIRRSSTSPGEVSDSACS
DSSRLVLTSFFANRKRKKPKDKSVANSSDDDLDAVFTKEEVQTEGQQPPLQTQADVQTDD
KERCRDSSEEELDKPVRDEPYPPHYLSPEHTPPALQTASPYPFPFPNLSYSVQTAHESST
SYDDVVSDLGTMNSTSSQASAPRTRRGKGACPGAEVCSITSDYSTTSSMTFLTGAEHGAL
SPEVQSVSESRGGDDADDERSELISEGRPVETDSESDLSVFTVGKPEEVSRAFPTQRLIE
CDTLSRKKSAQQKTDSESSLEKDSSRLSRGSGSVKGRSTGSLSASSRNELDKSEPAWKLK
ITDRLKVRLRMSADDMFGVGSQRSRSPEARSKKKKNIRRRHTMGGQRDFEELSVLGVWSQ
QGGGSGSRSELSAVDRLKPKCSSQDFSIGDWIARERHRTSNPEVSFDLSEQQGEPQNPGP
SEAPPSKNLSLSATAHPHKLTSSQVVHSRFYQYL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgttccggtggggtcctccctgtgaagatgaggagaaacgagcgcggttctct
tactgcgagaatgactatggcgcgtggaggactctggcagattcttttgcagcagaagag
gaatcgtttgcatggcagaggcccaaaactctacttttacgacgcacatcccaaggattc
ggtttcaccttgcgacacttcatcgtgtatcccccggaatcgagcgtgcacggcttccag
gtggaagatcaaggccgtagagggaggcagcagagtcggctggacgccatggacactata
tttgtgaagcaagtcaaggaaggtggtcctgctcatgaagctgggctttgcacaggtgat
cgaatagtgaaggtgaatggagccagcatcattgggaaagcctacggggaggtcatatct
ttgattcaagacagtggagactttcttgaactgtgcgtgatgccaaaagatgaagatatc
ctacagctggcttattcccaggatgcctacatccgtggccacagcagctacagtggaaac
gccagccacatccccgacccaccaccagtatgttaccccagaatagactgtaagcctacg
ggcatggcccaggcaacagatttgacagggcaggttggccgagggccaatgccagctcct
gaccacgggtatcgcaaggaaatcaccgtgcccccatctcctccccgtcagcagtaccct
aaaagtcaaaccgcagtgtgcatgctcaacaacaatgttaggactgtggtggttcctcct
attccggcccaaatggggcacatgggtccagcacacaggatggatttcacaggacctgcc
tttgtcagagggagacctgggtcattagcccagtatcctcaccctcaaaaggcggatgtc
taccctggtggtccaggtatggtcctaatgggagctcaggtgcctcagtacccaggaaac
catcaaaacattgactggcgcacataccaaacttacagggagtatattgataacaaggga
attcattcccatggcagtcggactatccaagaccggctggacagtttgcgaactgccagt
cagggtccttttcccaccccccatcacattgcccgaggtgactgggcccctaaggatata
cgacgcaggagtacgtcccatgaacggtcgtaccatggacctccacttcactttcaggtt
gccccacgaagtgtttcacaagaccgcatgctcaatgccgaaaagattagccgtgcgtca
gactggccccctcgaagtgcgtcccaagatggccttgtccacaaagctcgagtacgcacc
acagactatagtgatccagcagaactagcttggtctaatgagagaaaagtcggacctgga
agggcagaccaaggcaccaggccgaccagacagtcgatgcctagacacgctatgctttac
cggccctctgctggatttgggggtgccatgagggtgccaacaaacccttccttctaccac
aaaggaccaaattttaatcaaacccgatcaacccccatgctccctgaaaggaccgtacat
tatggaaatagcaaaagtgttgatcaatctttctccgaccaaagagttgcagtcagttta
ggccaaatgagccaacaaggccaaagccggatgcgagcagaaaccattcacaccactgag
acgagaagagacgaagcattgagaggagttcgatccgcatcgtgctctgctcccaaagag
ctcccccaaaggcccgtcatcctgaacgtatcccaaccagatcctcagaatgaaatcaac
gggcaaagtccgtcggaggtcgaggtggttctaaggcagaagcctccctctggaaagaac
ccaagtcccctgcggcaccactcctacatcctggctgtgaacgacgagggagcggacgtg
atggcgtgctatcttccaaacgatgcacgtcgggagatgcagatgcgccgcctcgaggag
catcacacctcctgctccagcaacctggacgagtctctggattccattccgttcattgac
gagcccgtcagcccgagtgtcgaccgggaggcgactcatattcctccctctgctgtgata
tctgttgcaccatccatagccacagcgccttccagtcaaggctcaccatgtcttcccatt
cgccgtcagctatcacatgaccaagaatccatgcgaagcgcgttgttggactcggactct
gccagtaaaaccgagcgctccaagtcttatgatgagggcttggacagctacccggaggag
ggcagggggagatcttctagtaaacaaatatcaggtttcaggggactacgaaagactctg
gacggacacaaatcatctggagatgctggatcccgcagggaatcttcttcctgcatcttc
cccgattcttccaaagaagggttgcttaacttccgacagctttgcacagagaaaaataag
cgtgtcagcggaggcttgaggtcatggaagcaaatatacgccgttctacaaggtcagact
ctgaccctgtacaaagatcggaaagacgctctgtcggaggaagacccgctgcgagtcggc
atcaaagcctgcctgattgacatttcctattgtgacacgagacggaagaacgtgctgcga
ctaaccaccacagactgcaagtatttgttccaggcagacggcaaggaggagatgttatca
tggatcaaagtcattcaggatagcagcaacccagacgaagagaatgctgcggtaaccagc
caggatctgatcaacaggaagatcaaagaatacagcatgagctcttccagcagcagatct
gaaccctcccccaaaacagccaggcagtcgctcagcatcaggcaagctctgctggggggg
aaaaacgatggccgggttcttagtccccattcccctaaaatgggagaggagcggaggact
cttaaagatgaggcaagtcctcctcgggaccggggagcctggaaaatcggtattccggga
atcatgaggaagccctttgaaaaaaagaccccagcggggatcacgtttgaaatccggctc
gaagactgtccaccttcaaaaagtaacgagtttgttccgctcatcgtggagctgtgctgt
caagtggtggaggagcgagggttggagttcacggggatctacagggttcctgggaagaaa
gccgccatctccagcatgcaggaggagctcaataccaaaggcatggcggacatcgacctc
caggaggagaaatggcaggacttgagcgtcattagcagtttactaaaactgttttttcgg
aaacttccagaacctctttttacaaacgacaaatatgatgaatttattgaagctagtaaa
actgaagacccagtggagagactcaagaagctcaagagactggtctatgaacttccaaaa
catcattttgaaactcttaaattcctttgcgctcacctgaagagggtttctgacaactgt
gaaaaaaacaagatggagcctcgtaacctggccatcatgtttggccccactctggtccgg
acctcagaagacgacatgaccaacatggtcaaccacatgccggatcagtgcaagatagtg
gagaacctcatccagcagtacgactggttcttcacagaggagaacgaagaagacccaatc
actaccgcagaccaggagggcacagttcagtcccagcctgtgcccaacatcgaccacctg
ctccccaacatccggcgcagctcaacctctccaggtgaagtctcagactcagcatgtagt
gactcctccagattagtgctcacctccttctttgctaaccgcaaacgcaagaagcccaag
gacaaatctgtggccaacagctcagacgacgacctggacgccgttttcactaaggaggag
gtgcagacggagggccagcagccgcctctgcagacgcaggcggacgtgcagacggacgac
aaagagaggtgcagggacagctcggaggaggagctggacaagcccgtgcgggacgagccg
tacccccctcactacctgtctccagagcacacgccccccgccctccaaacggcgtcgccg
taccccttccccttcccgaatctcagctactccgtgcagacggcccacgagtcgtccacc
agctacgacgacgtggtgtccgacctcggtacgatgaacagcaccagctcccaggcgtcg
gcgcccagaaccaggcgagggaagggggcgtgtccgggagccgaggtttgctccatcacc
tcggactactccaccacctcgtccatgaccttcctgaccggagccgaacacggcgcgctc
agccccgaggtgcagtcggtgtcggagagccgcggcggcgacgacgccgacgacgagagg
agcgagctgatcagcgaggggcggccggtggagacggacagcgagagcgacctgtcggtg
ttcaccgtcgggaagccggaggaagtttcccgagccttccccacccagaggctcatcgag
tgcgacacgctgtcgaggaagaagtccgcccagcagaaaaccgacagcgagtcgtctctg
gagaaggactccagcagactgtcccgcgggtccgggtcggtgaagggacgctccaccggc
agcctcagcgcctcctcgcggaacgagctggacaagtcggagccggcgtggaagctgaag
atcaccgaccggctgaaggtccggctgcggatgtccgccgatgacatgtttggcgtgggc
agtcagaggagccggtcgccggaggcccgcagcaagaagaagaagaacatccggcgccgg
cacaccatgggcgggcagagggacttcgaggagctgtccgtcttgggggtgtggtcgcag
cagggcggtggttccggctcgcggtcggagctgtcggccgtggaccggctcaaacccaag
tgcagctctcaggacttttccatcggagactggatcgccagagagcgccaccgcaccagc
aaccccgaggtcagcttcgacctctccgaacagcagggggagccgcagaacccgggaccc
tccgaagccccgcccagtaaaaacctgagcctgtccgccaccgcacacccccataagctc
accagttcccaggtggtccattcccgtttctaccagtacctgtga
DBGET
integrated database retrieval system
