Oryzias melastigma (Indian medaka): 112147161
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Entry
112147161 CDS
T07439
Symbol
acin1a
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
oml03015
mRNA surveillance pathway
oml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112147161 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
112147161 (acin1a)
03015 mRNA surveillance pathway
112147161 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112147161 (acin1a)
03041 Spliceosome [BR:
oml03041
]
112147161 (acin1a)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112147161 (acin1a)
Spliceosome [BR:
oml03041
]
Complex C
Other components
EJC/TREX
112147161 (acin1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
HeH
Motif
Other DBs
NCBI-GeneID:
112147161
NCBI-ProteinID:
XP_024129096
Ensembl:
ENSOMEG00000013014
UniProt:
A0A3B3DH14
LinkDB
All DBs
Position
LG17:22929834..22947583
Genome browser
AA seq
1690 aa
AA seq
DB search
MADLEDVTLDGRPLQSLRVADLKAALEERGLSKSGQKNALIKRLKGALMLENLQRTSTPH
IGLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAYETNDQQDHADVNNSTQCP
PPAQDTAGQHKPTEAEFGSMNAGQGNANQEADVSSPPASGSVSMRVPGVEQRQDRGFASG
EAAGDSDDDDSEGGEEDGNDDDWDSNARRRNFREQARVPTARERSGVSRQPQQQHIPPLL
SPQLRQPTPPPSPPPELSFPLPDTPKQSPPSPDVAPARHSPSTSSSGSSSSDSRSSSPEP
QRGAHAERKPGPLTLLARKMASEGAFSGPSWQGTEGEGDMQDNRSLEGLVSAITHTANTA
GHISFPMIPGGHQGVSGVHSAHTEVPVSVLRAAAVDDRDRQLQENEKALELERQEKMKKL
EQERALALEREKALEREKIERRQALEREEKEKALQREREFALERERQEREHALAKEREER
ERQRELERQRVLEQERLQREREEKEKREREERERQVELEKARERERKQQEIERALEQARL
KKEREEAEKKEKERLERERALELERLEKEKIEREKALEKERMEKERIEKEKALELQRIER
EKALEQERLEQERKEKERIEREKALELERIEREKREKEEKERLERERALEQERIEREERE
RKEKEAALERERLERERAEKERQEQLEREKALEQERLERERALEMERQKKEKALEIERQE
REKALEMERQEKERAMEMERREKEKALEMERQKKEKALEMERREKEKALEMERREKEKAL
EMERQKKEKALEEERERALEQERLEHEKAMKKEKEEKEKLISTERESETRLSPSKPAGEV
GLTSLPNPPLLSTGTAPNLPTEAGEREDARAPASASEAQAAKTDVTMSPRKKFQFVRVSP
AQPQSSSTPMVIKRPRTFSDTPQPRGPPVISLSSAKEQQPEMSPLKQQDPQNREASTAAV
QSEQKDATKPAVHQDQQQNETKKPVSVEKQDDSTKAQGAAKKAEENNESSSCTPEQRSAD
VKKKKTRSSSNDSSSSESDSGSSSSSSSSSSSSSQDKTSSRGREEGKRERNSSQNYMDTS
EAQTEVLKETKNASHCRNSLSLENNNNIDGEMSNKHPSEATVRGESIQTTENEEEEERGK
QRQEKETAMVDSQKLSETAEETPKAFSARKISLGNNKSSPGASSTEAEQESGGVAGRKRR
WGSSTVVTAKKPSISITTDSLKSLIPDIKPSLGQEAVVELHPEEAALSGAEEEDGERSEQ
DLQIRRTVTQVVHTESPENGEKEAKRSRREEPEEDCRPDQERIKTQEEPVEVSLHGTVEA
QLPAHTSHDVEMNTVTPSDTLIRRSISQQKMGVSITIDDPVRTAQQPSPPRGKVSNIVHV
CNLVRPFTLGQLKELLSRTGSLVEDGFWIDKIKSHCYVTYSSVEEAVATRTALHGVKWPQ
SNPKVLSVDFCQQDELDFHKSLGTAERPGDDQGPAPGRGRALGLPSLLPERDQWAERERE
MERRERARAEREWDRDKVKEFGKRGEEKEGGSRRSRSRERRRKERGKSKEKKTDKKADEP
PAKLLDDLFCKTKATPCIYWLPLTDEQYVQRQAARAERMKEREKLRKELEEEEEKKREEE
RKERMKTTGATTGDRGEGEKDKDRDRERDRDRGRDRENDKRRDGHRRPGASGASSSRRSR
SRSDPRDRRR
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccttgaagacgttacgctggacgggagaccgcttcagtccctccgagttgcg
gatttgaaagcagctctcgaggaaagagggctgtcgaaaagcgggcaaaagaatgctctc
attaaaagacttaaaggggctctcatgctggagaatttgcagagaacctctacacctcat
attggtcttcagccaaactctcagattggtgaagaaatgagtcaaaacagttttatcaaa
cagtatttggctaagcagcaggaacttctgaggcagcgcctggaaagagaggctcgggaa
gcatatgaaacaaacgatcaacaggaccatgcagatgttaacaacagtacacaatgccct
cctcctgcccaggatacagcagggcaacacaagccaactgaggcagagtttgggtcaatg
aatgcagggcaaggaaacgctaatcaggaagctgacgtgtccagtccacctgcctctggc
tctgtatccatgcgggttcctggtgttgagcaaagacaagatcggggctttgcgtctggt
gaagccgcaggtgatagtgacgacgatgacagtgaaggcggagaagaagacggcaacgat
gatgactgggacagtaacgctcgcaggagaaatttccgagaacaagccagggtgcccaca
gcaagggagaggtcaggggtatcccggcaaccgcagcagcaacacatccctccccttttg
tctcctcaactccgccaaccgacacctcctccttcccctcctccagaattgtcatttcct
ttacccgataccccaaaacagagcccacccagtcctgatgtcgccccagccagacactca
cccagtacctccagctccggttcctccagcagtgacagccgcagtagcagtccagaacca
caaaggggcgcacacgctgagcgcaagcccggcccgctgaccctgctggcacgcaaaatg
gcatcagagggggctttctctggaccaagttggcaaggcacagagggagaaggcgatatg
caagacaacaggtctctagagggtctggtatctgccatcactcacacagcaaatacagca
ggccatatatcatttcccatgattccaggaggccaccagggtgtctctggtgtgcattct
gctcacaccgaagtgcctgtgagtgtgcttagggccgcagcggtagatgacagggacaga
caacttcaggaaaacgaaaaagcacttgagttggagcggcaggagaagatgaagaagctc
gagcaagaaagagcacttgctctcgagcgggaaaaggctttggaaagagagaaaatcgag
cgacggcaagcattagaaagggaagaaaaagagaaggctttacagcgggaacgagaattc
gctctggaaagagaaaggcaggagcgggagcacgcactggctaaggaaagggaggagcga
gaaaggcagagggagctcgaaagacaacgagttctggagcaggagcgcctgcagagagaa
agggaggagaaggagaagcgggaacgggaggaaagggagaggcaggtggagctggagaaa
gccagggagcgggagaggaaacagcaagagattgaacgggctctggaacaagcgaggttg
aagaaagaaagagaagaggcagagaaaaaggagaaggaaagactcgagcgagaaagagct
ttggagctcgaacggctggaaaaggaaaaaatcgagagggagaaagctttggagaaagag
aggatggaaaaggagagaattgagaaagaaaaagctttagagcttcaaaggatagaacga
gaaaaagctctagagcaagaaagactggagcaagagaggaaggagaaagaaagaattgaa
agagagaaagcgctggagcttgagagaatagagagggaaaaacgagagaaggaagaaaaa
gagaggcttgaaagagagcgagctctcgagcaggaaagaatcgagagggaagaacgagag
agaaaggagaaggaggccgctctagaacgggagagattggagagggaaagagcagaaaaa
gaaaggcaagaacagctggagagggagaaagctctagagcaggagaggcttgaaagggaa
agagctttggagatggaaagacagaaaaaggagaaagctttggagatagagagacaggaa
agggagaaagccttggagatggaaagacaggaaaaggagagagctatggagatggagaga
cgggaaaaggaaaaagctttagagatggaaagacagaaaaaggagaaagctttggagatg
gagagacgggaaaaagaaaaagctttggagatggagagacgggaaaaagaaaaagctttg
gagatggaaagacagaaaaaggagaaagctttggaagaagaaagagaaagggctctggag
caggaaaggctggagcatgagaaggccatgaagaaggaaaaagaggagaaagaaaagctt
atcagtacagaaagggagagcgagacccgcctttctccatccaaacctgctggtgaggtt
ggtctgacttccctgcccaatcctccactcctgtctacaggaacagctccaaacctgccc
acagaagcaggagagcgtgaagatgcccgcgctccggcgtctgcaagtgaagctcaggca
gcaaagactgatgtaaccatgtcaccgcgtaagaagtttcagttcgtacgggtctccccg
gctcagccccagtcatcctccacgcctatggttatcaagcggcctcgcactttctcagac
acccctcagcccagaggcccacccgtcatctcattgagcagtgctaaagagcaacagcct
gaaatgtcccccctcaagcagcaagacccccagaatcgagaagcttcaaccgcagcagtt
cagtccgagcagaaagacgcaactaaacctgcagtgcaccaggatcaacagcaaaatgag
accaaaaagcctgtgtctgtggaaaaacaggacgattcaacaaaagctcaaggggcagca
aaaaaagcagaggaaaacaacgagagctcatcatgcactccagaacagaggagtgctgat
gtaaagaagaagaaaacaagatcatcatctaatgactcctcctcttcagagtcagactct
ggatcttcatcgtcgagctcttcgagctcatcctcatcttctcaggataaaacctcttca
agaggcagagaggaggggaagcgtgaaagaaattcttcccagaactacatggacacatca
gaagcccagacagaggttttgaaggaaaccaaaaacgcctctcactgcagaaattccctc
tctttagagaacaacaacaatattgacggagaaatgtccaacaagcacccgtctgaggca
acagttagaggagaatcaatacagaccacagaaaatgaagaagaggaggaacggggcaag
caaaggcaggagaaggagacagccatggtcgactcacagaagctctcagagactgcagag
gagacgccaaaagccttctcagcacgcaagatctctcttggcaacaacaaatcctcccca
ggcgcgagtagtacagaggcggagcaggagtctgggggagtggctggtcgcaaaaggagg
tggggctccagcactgtcgtcactgccaagaagccttccatcagcatcaccacagattca
ctaaagtctctgattcctgacatcaaacccagtttgggtcaggaggcagtagtggagcta
catccagaggaagctgccctctctggggcagaagaggaagacggggagcgctctgagcag
gaccttcaaatccgccgcactgtcacacaagtggtgcacacagaaagcccagagaatggg
gagaaagaggcgaagagaagcagacgagaggaaccagaggaggattgtcggccagaccaa
gaaagaataaagacccaggaagagccggtggaggtctccctccacgggaccgtggaagcc
cagttgccagcacacaccagccatgatgtagaaatgaacactgtgactcccagcgatacc
ctcattcgtcgctccatcagccagcagaaaatgggcgtttccatcaccatcgacgaccct
gtccgcacagcccagcagccctccccaccccgaggaaaagtctccaatatcgtccacgta
tgcaacctggtgaggccgttcacactcggacagctgaaggagctgctcagcagaactgga
tcgctggtggaggacggcttctggatcgataagatcaagtcccactgctacgtcacttat
tccagcgtagaggaggcggtcgctacaaggacagccctccatggagtgaagtggcctcag
agcaaccccaaagtcctcagtgttgacttctgccagcaggatgagttggacttccacaag
agtttgggaacagcagagcggccgggagatgaccaaggccccgcccccggccgtgggcga
gcgttaggcctgccctccctgctcccagagcgagaccaatgggctgaacgggagcgggag
atggagcgccgggagcgggcccgggcggagcgcgagtgggatcgggacaaagtcaaggag
ttcgggaaacgaggggaggagaaggaggggggttctcggagatcacgctccagagagaga
agacgtaaggagaggggaaagagcaaggagaagaagaccgacaagaaagctgatgaacct
cctgcaaagttgctagatgatttgttctgcaaaactaaagcaactccctgcatttactgg
ctcccactgacagatgaacagtacgttcagcggcaagctgcccgcgccgagcggatgaag
gagcgggagaagctaaggaaagagctggaagaggaggaggagaagaaaagggaagaggag
cgcaaagagcgaatgaaaaccacaggcgccacaaccggagaccggggcgagggtgagaaa
gacaaggaccgggacagggagagggacagagaccggggcagggaccgggagaatgacaaa
cgcagggacggccatcgtagaccgggggccagcggggcaagctccagccggcgttcacgc
agccgcagcgaccccagagaccggaggcgctga
DBGET
integrated database retrieval system
