Oryzias melastigma (Indian medaka): 112147205
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Entry
112147205 CDS
T07439
Symbol
serbp1b
Name
(RefSeq) plasminogen activator inhibitor 1 RNA-binding protein isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112147205 (serbp1b)
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112147205 (serbp1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IHABP4_N
HABP4_PAI-RBP1
Motif
Other DBs
NCBI-GeneID:
112147205
NCBI-ProteinID:
XP_024129189
Ensembl:
ENSOMEG00000010108
LinkDB
All DBs
Position
LG17:24033505..24041109
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AA seq
406 aa
AA seq
DB search
MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEGAAAGSTKTAAQAAKQPKKE
SQKDRKNPLLDKKDESQAPVPLKKEGIRRVGRRPDQQGQPGSQHQGGQGEGRPGDKRPDR
RPPRERRFEKPAEDKPEAGGEFPADKPSSDRPPRGRGGGRGGRGGRGRGMGRGEGFDSRG
KRDFDRHSANDKSSNPKSEEKRGGGGSHNWGNVKDEVNEAEQTAAPETTPEGEENTPAGS
ENKENEVEEVKPEGPKEMTLDEWKAMQDKERTKVEFNIRKPNEGTDSQWKKGYVLHKSKS
EDRPVGALIDSSEMEAESHALFNKQGTPDESGDHHFRKPANDITSQLEINFGDLGRPGRG
RGGARGGRGGRGGGGSRTARGGGRSEKASGASVPNVDDPEAFPALS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcccggacacttgcaagaaggcttcggctgcgtcgtaactaacaggttcgaccagtta
tttgacgacgagtccgacccgttcgaggtcctgaaagctgccgaaaacaagaagaaggag
ggggccgccgctggttccaccaagaccgcggctcaagccgccaagcagccgaagaaggag
tcacagaaggacaggaaaaacccactgctggacaaaaaggacgagtcgcaagcaccagtt
cccctaaagaaagaaggaatcagacgagtgggcagaagaccagaccaacagggccagcct
ggatcccagcatcaaggtggccagggagagggccgacccggggacaaaaggccagaccgg
agacctccacgtgagcgccgctttgagaaacctgctgaggacaagcctgaggcaggagga
gagttccctgcagacaagccttccagcgacaggccacccagagggcgtgggggtggccgg
ggcggccgtggtggaagaggacggggcatgggccggggagagggttttgattcacgcgga
aaacgagacttcgacaggcacagcgccaacgacaaatccagcaatccaaaaagtgaggag
aagcgtggaggaggcggctcacacaactggggcaacgtgaaagatgaagtaaatgaggcc
gaacagaccgcagctcctgagacgactccagagggggaagagaacacgcctgctggctcc
gagaacaaagaaaatgaagttgaagaagtgaaacccgaaggtcccaaagagatgacgctg
gacgagtggaaggccatgcaggacaaggagcgcaccaaggtggagttcaacatccgtaag
cccaacgagggaactgacagccagtggaagaagggatacgtgctgcacaagtccaagagt
gaagaccggcctgtcggagctttgatcgattcttcagagatggaggcggagtctcacgct
cttttcaacaagcagggcacccccgacgagtccggtgaccaccacttccgcaagccggcc
aacgacatcacatcccagctggagatcaactttggagacctgggccgtcccggtcgcggg
cgtgggggcgctcgtgggggcaggggaggccgcggcgggggaggcagcaggacggcacgc
gggggaggacgctccgaaaaggccagcggagcatcagtccccaacgtggacgatcctgag
gccttcccagccctgtcctaa
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