Oryzias melastigma (Indian medaka): 112147213
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Entry
112147213 CDS
T07439
Name
(RefSeq) protein zyg-11 homolog
KO
K10350
Zyg-11 protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112147213
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
112147213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_4
LRR_Zer-1
ARM_UBP24_USP9X-Y
LRR_8
LRR_EndoS
LRR_At5g56370
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
112147213
NCBI-ProteinID:
XP_024129205
Ensembl:
ENSOMEG00000009023
UniProt:
A0A3B3BQX4
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All DBs
Position
LG17:complement(24657491..24666773)
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AA seq
733 aa
AA seq
DB search
MDPEGPQALCDLCLAQVCCSLEALCSKRADGSMSLIWAPLFPPELADRLLQAMASKAMLN
DATVGIFRDSKELRLRRASIRRCVMSAEAFRLALCPHRLLELDASWASEGLTGASVVSGL
VSSPACRLNLQKLSLSGLHLDWGSLEDGCVGFSSLRGLKTLHLASTDLTDDILEDVCSLP
HLESLDISCTPISKLSALLQCKNSLRSLIAHRLRQLNMSPSRLFFVLSQLDALRHLDFSD
DHFGADDLDGRDGDEVARQLLEGSSQILPSLVSLDLSGWKTISEAALAAFVESRRGLLFL
GLLDTGLSSSHVLTAQRNLKVTGEANENQVCEALGRYTERECFVQKALLHLYRLTTDADR
AQPDTLKLVLGAMKSHPSSLQVHLVATACVFNLTTQDLAEAMPVTLISSAIAQLLHAMKT
FPNHQQVQKNCLLALCSDYILQDIPFDRYLAAMLVINWLSNHEDATLQRMAVAVISILVA
KLSKEETGKLSQDVVFMKQLLAIVQQKAMVGVVDSTLKFALSALWNLTDEMPSAARSFIQ
CQGLELYEEVLESYYNEPTIQQKILGLLNNIAEVKELQADLMDEDLLEHILILLKDTQVE
VGVRYFAGGILAHLTSRAEAWTLDQELREAILKQLHESIITWPHLEREMVSYRSFCPFSP
LLLTHQPSGVQLWAVWAIHLVCSQNTSHYSSMLEKDGVTELLKALAAHPDTHDDIKRLVG
SILCMVEGGAQRS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggatccggagggcccccaggcgctgtgtgacctctgcctggctcaggtgtgctgcagt
ctagaggctttgtgcagcaagagagcagacggctccatgagcctcatctgggcccctctg
ttccccccggagctggccgacagactgctgcaggccatggcatccaaagcaatgctgaac
gacgccaccgtcgggattttccgagactctaaggagctccgtctgcgccgagcctccatc
cgccgctgtgtgatgtccgccgaggctttccgcttggccctctgccctcaccggctcctg
gaactagacgcctcctgggcctcggagggcctgacgggagccagcgtggtgtctggtctg
gtttccagccctgcgtgcagactcaacctgcagaagttgtcgctgagcggattacacctg
gactgggggtctttggaggacggctgtgttggcttcagctccctgcgagggctgaagacg
ctccacctcgccagcacggatctaactgatgacatcctggaggacgtctgctcgctcccc
cacctggagagtctggatatctcctgcactcccatctcaaagctctccgctctcctccag
tgtaaaaactctctgagatctctcatcgctcacaggctgcggcagctgaacatgtctccg
tccaggttgtttttcgttttgagccagctcgacgccctccgccatctggacttttcggat
gaccacttcggtgccgacgacctggacgggagggacggagacgaggtggcgcggcagctc
ctggaagggagctcccagattctgccctcgctggtttcgttggacctgtcggggtggaag
acgatcagcgaagccgcgctggcggcctttgtggagtccaggcgcgggctgctctttttg
ggcctcctggacaccggcctcagctctagccacgtcctgactgcgcagagaaacctgaaa
gtaactggagaggctaatgagaaccaggtgtgcgaggctctggggaggtacacagagcgc
gagtgtttcgtacagaaggccctcctccacctctacagactaaccacggatgcggacaga
gctcagccagacacgctgaagctggtgctcggcgccatgaagagccacccgtcctcccta
caggtccaccttgtagccacggcgtgcgtgttcaacctaaccacgcaggacctggcggag
gccatgcccgtgaccctgatcagctccgccatcgcccagctcctgcacgccatgaaaacc
ttccccaaccaccagcaggtgcagaagaactgtctcctggcgctctgcagtgactacatc
cttcaagacattccctttgaccggtatttggcggccatgctggtgatcaactggctgagc
aaccacgaggacgccaccttgcagaggatggccgtggctgtcatctccattctggtggca
aagttgtccaaagaagagacggggaagctcagccaggatgttgtctttatgaagcagctg
ctggcgatcgtgcagcagaaagccatggtgggagttgtggactccactctgaagtttgcc
ctcagcgctctgtggaacctgactgatgagatgccctcagcggcacgcagcttcatccag
tgccaaggcttggagctatacgaggaagtactggagtcctattacaacgaaccaacaatt
cagcagaaaatactcggtcttttgaacaacatagcagaggtgaaggagctgcaggcagat
ctgatggatgaagatctgctggagcacatcctcatcctcctaaaggacacccaggtggag
gtgggggtgcgttactttgcaggagggattctggcgcatctcacctccagagcagaggcc
tggaccttggaccaagagctccgggaggctatcctaaagcagctgcacgagtcgattata
acttggccgcatctcgagagggagatggtgtcttaccggtctttctgtccgtttagcccc
ctgctgctgactcaccagccgtcaggagtgcagctgtgggcagtctgggccatacatctg
gtctgcagtcaaaacacttcacattacagtagcatgctggagaaggacggcgtgactgaa
ctcctgaaagccctggctgcacatcctgacactcacgatgacattaaacgcctcgtcggc
agcattttgtgcatggtggagggcggtgctcagcggtcgtga
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