KEGG   Oryzias melastigma (Indian medaka): 112147275
Entry
112147275         CDS       T07439                                 
Symbol
arf1
Name
(RefSeq) ADP-ribosylation factor 1
  KO
K07937  ADP-ribosylation factor 1/2
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04144  Endocytosis
oml05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    112147275 (arf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112147275 (arf1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oml04147]
    112147275 (arf1)
   04031 GTP-binding proteins [BR:oml04031]
    112147275 (arf1)
Membrane trafficking [BR:oml04131]
 Endocytosis
  Lipid raft mediated endocytosis
   GRAF1-dependent endocytosis
    112147275 (arf1)
  Arf GTPases and associated proteins
   Arf GTPases
    112147275 (arf1)
 Endosome - Golgi transport
    112147275 (arf1)
Exosome [BR:oml04147]
 Exosomal proteins
  Proteins found in most exosomes
   112147275 (arf1)
GTP-binding proteins [BR:oml04031]
 Small (monomeric) G-proteins
  Arf/Sar Family
   Arf [OT]
    112147275 (arf1)
SSDB
Motif
Pfam: Arf Roc SRPRB G-alpha Ras Gtr1_RagA MMR_HSR1 GTP_EFTU 6PF2K cobW
Other DBs
NCBI-GeneID: 112147275
NCBI-ProteinID: XP_024129301
Ensembl: ENSOMEG00000007598
LinkDB
Position
LG17:5337273..5341122
AA seq 179 aa
MGNVFAGLFKMFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI
SFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERCGEAREELLRMLAEDELRDAVL
LVFANKQDLPNAMNAAELTDKLNLHSLRNRNWYIQATCATTGDGLYEGLDWLSNQLKSH
NT seq 540 nt   +upstreamnt  +downstreamnt
atggggaacgtgtttgcaggactctttaaaatgtttgggaagaaagagatgagaatactc
atggtgggtctagatgctgcaggaaagacgactattttgtacaaacttaaacttggagag
attgtgaccaccatccctaccataggctttaatgttgagactgtagagtataaaaacatc
agcttcactgtgtgggatgttggcggccaggacaaaatccgaccattgtggcgtcattac
ttccagaacactcaaggcctcatcttcgtcgtggacagcaatgacagagagcgatgcggc
gaggcccgggaggagctcctgaggatgttggcggaggatgagctgcgggatgctgtcctg
ttggtttttgccaacaaacaagacctcccaaacgcaatgaacgctgcagaactaacggac
aagttgaaccttcactccctgcgtaacagaaactggtacatccaggcgacctgcgccacc
accggagacggtctctacgaaggacttgattggctgtccaatcagctcaagagccattaa

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