Oryzias melastigma (Indian medaka): 112147281
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Entry
112147281 CDS
T07439
Symbol
ss18
Name
(RefSeq) protein SSXT isoform X4
KO
K15623
protein SSXT
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112147281 (ss18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112147281 (ss18)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112147281 (ss18)
GBAF(ncBAF) complex
112147281 (ss18)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
112147281
NCBI-ProteinID:
XP_024129308
Ensembl:
ENSOMEG00000004158
UniProt:
A0A3B3BC88
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All DBs
Position
LG17:8418760..8433425
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AA seq
384 aa
AA seq
DB search
MSVAFAPHRQRKGDITAAGIQKLLDENNHLIQCIMDFQSKGKTAECSQYQQMLHRNLVYL
ATIADSNQNMQSLLPAPPTQNMPMGPGGMNQSGPPPQPPHGHNMPSEGMVSVGPPAPHMQ
SQMNGQMPGPNHMPMQGPGPGPNQPPNMSSGSMNIPPSSHGSMGGYNHTVPSSQGMPVQS
QMSMTQGQPMGNYGPRPNMNMQPSQGQTGPMMHQQPPSQQYNMPPGSGGQHYQGQQNPMG
MMGQVNQGNHVMGQRPMPPYRPPQQGPPQQYPGQEDYYGDQYSHAGQGASEGNAQYGQQQ
EAYQQGPPQQQGYPPQQQYPGQQGYPPQQQGYGPSQSAPGQYPNYPQGQGQQYGAYRPPQ
PGPPQGQQQRPYGYDQGQYGNYQQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggcgtttgcacctcacaggcagcggaaaggtgatataacagccgcgggaatc
cagaagttacttgatgaaaacaaccacctgatccagtgtataatggacttccagagtaaa
ggaaaaacagcagaatgttcacagtatcaacagatgcttcatagaaatttagtgtacttg
gccacgatagcagactccaatcagaacatgcagtctctccttcctgctccacccactcaa
aacatgcctatgggccccggtggcatgaaccaaagcggacctcctccccagcccccacat
ggtcacaatatgccctctgagggtatggtcagtgtcggccccccagccccccatatgcag
agccagatgaacggacagatgcccggtcctaatcacatgcccatgcaaggacccggcccc
ggccccaaccagcctccaaacatgtccagcggttccatgaacatcccccccagcagccac
ggctccatggggggctacaaccacaccgtcccgtcctctcaggggatgccggtccagagc
caaatgagtatgacccaaggccagccaatggggaactacggaccccgaccaaacatgaac
atgcagccgagtcaaggtcaaacaggtccaatgatgcatcagcagcctccgtcacagcag
tacaacatgccccccggtagtggcggacagcactaccaaggacagcagaacccgatgggc
atgatgggtcaggtcaaccaggggaaccacgtcatgggacagaggccaatgccgccctac
agacccccacagcaaggaccccctcagcagtaccccggacaggaagactactatggggac
cagtacagtcacgcaggccagggcgcctcagaaggtaacgcccagtacggccaacagcag
gaagcgtaccagcaaggtcccccacagcagcagggttatcccccgcagcagcagtacccg
ggtcagcagggctacccgccacaacagcaaggttacggcccctcccaaagtgctccggga
cagtaccccaactacccacaggggcagggccagcagtacggggcctatcgtcctccccag
cctggacccccccagggccagcagcagcgcccttacggttacgaccagggccagtatgga
aattaccagcaatga
DBGET
integrated database retrieval system
