Oryzias melastigma (Indian medaka): 112147286
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Entry
112147286 CDS
T07439
Name
(RefSeq) CTD small phosphatase-like protein isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112147286
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112147286
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112147286
Protein phosphatases and associated proteins [BR:
oml01009
]
HAD phosphatases
Fcp/Scp phosphatases
112147286
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
112147286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
112147286
NCBI-ProteinID:
XP_024129319
Ensembl:
ENSOMEG00000012204
LinkDB
All DBs
Position
LG17:23119935..23138133
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AA seq
274 aa
AA seq
DB search
MDHMSIITQVPNTKEEEIISFNQDKASQSNNSLKKQRSRSIFSTFLCCFRNYNVEPPVTN
TSSVPPPVEENGSPPKCDQVEVLPVPSPPAKYLLPETTITDYGKKCVVIDLDETLVHSSF
KPISNADFIVPVEIDGTVHQVYVLKRPHVDEFLQKMGELFECVLFTASLAKYADPVADLL
DQWGVFRARLFRESCVFHRGNYVKDLSRLGRELNNVIIVDNSPASYIFHPENAVPVQSWF
DDMNDTELLDLLPFFEGLSKEEEVYGVLQNFRSR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggaccacatgtccataataacccaggtccccaatacaaaggaggaggaaataatctcc
tttaaccaagataaagcatcccagtcaaacaacagcctgaagaagcagaggagccggagt
atattcagcacattcttgtgttgctttcgcaactacaatgtggagcccccagtcactaac
acaagctccgtgccccctcctgttgaagagaacggatccccccctaagtgtgaccaagtc
gaggtcctccctgtccctagtcctccagccaaatacctcctgccagagaccacgataact
gattacggtaaaaagtgcgtggttattgacttggatgaaacacttgttcacagctccttt
aagcccatcagcaatgcggatttcatcgttccggtggagatagatggtaccgttcatcag
gtttatgtgctgaaaaggcctcacgtggatgaattccttcaaaagatgggggagctgttt
gagtgtgtgctcttcacagccagtctcgccaagtatgcagaccccgtagcagacctcctg
gaccagtggggggttttccgagcgcggctcttcagggagtcctgcgtctttcacagaggg
aactacgtcaaagacctcagccggctgggacgagagctcaacaacgtcatcattgtggac
aattcgcctgcctcctacattttccatccagaaaatgctgtcccagtccaatcctggttt
gacgacatgaatgacacggagctgctggacctgctgcctttctttgagggactcagtaag
gaagaagaagtttacggcgtcctgcagaacttcagaagcaggtag
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