Oryzias melastigma (Indian medaka): 112147341
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Entry
112147341 CDS
T07439
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112147341
Ion channels [BR:
oml04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
112147341
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
Med4
DALR_1
Motif
Other DBs
NCBI-GeneID:
112147341
NCBI-ProteinID:
XP_024129423
Ensembl:
ENSOMEG00000005998
LinkDB
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Position
LG17:26271762..26354596
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AA seq
987 aa
AA seq
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MRHRYAGAVHQHQIPASKPAKTEPRREQVAPVFCLPPPPSSRERTAAAAHRQSLQELPCL
IQPPRRPVHSGDPLPLARYDTTRPPAQRGAAASSGEPAHLQQDPWAPSGCRQQQPQPPPL
QSEGEPFFPGCHCSFSEQEAILPRNKPPSLLPPPPPPPSSSLLLSQGSKGRSGNNCKEGS
IVERCRGGGGGGQRDHRQLLQQQQQQQQRCHLRLQQRDPSPEGSRANSQKGRSLNVCEAT
ESGRAFESPPRELQQQQQQQQQQIPQLRAQQQLLVGSSLPVNYCASGSGELCRTQQAPLL
RQQQQQQQQQQQQQQQQQQGALGISARRPQQHCEPDRNKCARTAQAQPHSRVTPPVTPQP
HAGNSDCSSSSSSRGSPNYGSSYHLWPESPHKGEEIIRIDLHKATTEQRKLSHAGSKPSL
SESSGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRNLAELDSETQPLQTLHSSGLEVVVS
KGNGGEDPSKASNESLVREGSGRGGGRAPQKKNRDIGYKLGHRRALFEKRKRLSDYALIF
GMFGIVVMVTETELSWGVYTKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNG
ADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTWTARLAFTYTPSVADADVDIILSIP
MFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISS
WIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFLSIGYGDMVPHTYCGKGVCLLTGIM
GAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVK
KIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQE
RSEELDKRIGTLEDKLDSVTGSLQALPCLISQAISQQQQDFLDGFVHRFRPASLASERSE
RSERSWTSTTRRRRSPSTAPHTSSDSG
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccatcagcaccaaatccccgccagcaagccagcg
aagaccgagccccgccgagagcaagtcgcgcccgttttctgcctgccgcccccgccctct
tcccgagagcgcaccgccgccgccgcgcaccgccagagtctccaggagctcccgtgtctg
atccagcccccacggagaccggtccacagcggcgacccgctccctctggcgcgctacgac
accacccgcccaccggcgcagcgaggagccgcagccagcagcggggagccggcgcacctg
cagcaggatccctgggccccgtccggctgtcggcagcagcagccgcagccgccgccgctg
cagtcggagggggagcctttttttccaggctgccactgcagcttttcagagcaggaggcg
atccttccacggaacaagcccccctcacttttaccgccgcctcctcctccgccgtcctcc
tctctgctcctttcccagggatctaaaggaaggagcgggaacaattgcaaggaggggagc
atcgtggaacgctgcaggggaggaggaggaggagggcagcgagaccacaggcagttgttg
cagcagcagcagcagcagcagcagcgctgtcatttaagactccaacagagggacccctcc
cctgaaggaagccgtgcaaactcgcagaaggggcgctctttaaatgtgtgcgaggccaca
gagtctgggagagcatttgagagtccgcctcgggagctgcagcagcagcagcagcagcag
cagcaacagatccctcaattacgcgcgcagcaacagctgctggtgggaagcagcttgcct
gtcaactactgcgccagcggctcaggggagctatgtaggactcagcaggctccactgctg
cgacagcaacaacaacagcagcagcagcagcagcagcagcagcagcagcagcagcaaggt
gcgctgggaatctctgcccggcgtccgcagcaacactgtgaaccagatcgcaataagtgc
gcgaggaccgcacaggcgcagccgcacagccgcgtaaccccgccggttacaccgcagcca
cacgcggggaattcagactgcagcagcagcagcagcagcagaggcagccctaactacggc
tccagctatcacctgtggccggagagcccgcataaaggagaggagataatccgcatcgac
ctccataaggccaccactgagcagaggaagctgagccatgctggatccaagccctctctc
tctgagagcagtggccgactccctcagatagccatgaacacctgcaagtacaatggcgga
gtggtgagaccattagtgggcagcctggcgtcctcgtcgcgccgcaacctcgcagagctc
gactcggagacacaacccttgcagacgctgcacagctctggcctggaggtggtggtttcc
aagggcaacggcggtgaagaccccagcaaggcttccaacgagagcttagtcagggagggc
agcggtcgaggtggcgggagggctccacagaagaagaacagggacattggctacaaactt
ggtcatcggagagcgctgtttgagaagaggaagcggctgagcgattacgcactcatcttt
gggatgtttgggattgttgtcatggtgacagagacagaactttcgtggggggtttacact
aaggaatcttcatactcatttgcactgaaatgcctcatcagcctttccactgttatactg
cttggtcttataataatgtaccacgctcgggaaatccagctctttatggtcgacaacggc
gcggacgactggaggatagccatgacgtacgagcggatcttcttcatcgtgctggagctc
ctggtgtgtgccatccaccccatccccggccaatacgtcttcacgtggacggcgcgcctg
gccttcacctacacgccgtccgtggccgacgcggacgtggacatcatcctctccatcccc
atgttcctgagactctacctgatcggcagggtcatgctgctccacagcaagctgttcacg
gatgcttcgtcccgcagcataggcgccctcaataagatcaacttcaacacgcgcttcgtc
atgaagaccctcatgaccatctgtccaggaactgtgttgctggtgttcagtatatcctcc
tggatcattgctgcatggactgtgcgtgtctgtgagaggtatcatgacaaacaggaagtg
accagtaacttcctgggagccatgtggctcatctcaattaccttcctctccattggttat
ggggacatggtgccacacacgtactgtgggaaaggcgtgtgtctgctgacagggatcatg
ggtgctggttgcactgcactggtcgtcgcagtggtggccaggaagctggagctgaccaag
gctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacgagtgaagaac
acagctgccaatgtactcagggaaacatggctcatttacaaacacaccaagctggtcaag
aagatagatcacgccaaggtccggaaacaccagcgcaagtttctccaagccattcaccaa
gctcagaaactgcgcagtgtgaagatggagcagaggaaactgaatgaccaggctaacacc
ttggtggacctggcaaagacgcagaatgtgatgtatgacttggtgtcggagctgcaggag
cgcagtgaggagctagacaagcgcatcggcacgttggaggacaagctggactcggtaacg
ggcagcttgcaggctctgccctgcctcatctcccaagccatatcccagcagcagcaggac
ttcctggacggctttgttcaccgtttccggcctgcttccctagcatcggagcgttccgaa
cgctccgagcgatcctggacttccaccacccgcaggaggcgctccccctcgacagcaccg
cacacttcctccgacagcggataa
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