Oryzias melastigma (Indian medaka): 112147342 Help Entry 112147342         CDS       T07439                                  Symbol tnr Name (RefSeq) tenascin-R isoform X1   KO K06252   tenascin Organism oml  Oryzias melastigma (Indian medaka) Pathway oml04510   Focal adhesion oml04512   ECM-receptor interaction oml04518   Integrin signaling Brite KEGG Orthology (KO) [BR:oml00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     112147342 (tnr)    04518 Integrin signaling     112147342 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     112147342 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:oml00536]     112147342 (tnr) Glycosaminoglycan binding proteins [BR:oml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    112147342 (tnr) SSDB OrthologParalogGFIT Motif Pfam:  fn3 Fibrinogen_C EGF_TEN EGF_Teneurin Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C Fn3_PBP1 EGF_Tenascin EGF_2 Pur_ac_phosph_N FN3_Tor_3rd Fn3_Dep-1_2nd Interfer-bind Fn3_VIN3 DUF4998 DUF7949 SPE9_EGF_3rd Motif Other DBs NCBI-GeneID:  112147342 NCBI-ProteinID:  XP_024129425 Ensembl:  ENSOMEG00000023556 UniProt:  A0A3B3E2Q7 LinkDB All DBs Position LG17:10001725..10194791 Genome browser AA seq 1380 aa AA seqDB search MQLATMSATTWILAVALLLAMQGAAHAAPSGDNKLVRTSRVRRQTPGGDQPPSASSTNQT LKEQPLIFNHVYNINVPLESLCSVDLDASAAAAPDSNAELGSRPSAEGPMDPNRSGPTEF TEQTLDADSQVTFTHRINIPKAACGCPATMAIQQLATRVEMLEREVSMLRAQCGSGCCGE SSAMGHLDFVPGCSGHGSFSFDLCGCICEESWTGKNCSEPRCPNDCSGQGVCIEGECVCD RDFGGDNCSEPRCPSDCSGRGLCIDGECVCEESFTGEDCMVGRCLNDCSDQGLCVNGTCQ CRPGYVGEDCSMVYCANNCSKKGICKEGFCVCQDGFAGDDCNSVAPAMNLNVRGVTDHTI DLEWEGSVMITDFLVTYTPSTPGGVQLEIRIPGNATSCSISGLEAGLEYNINVFAVINNT ISIPASITVWTYLSNPDGLLFKSITETSVEVQWNPFYYSFDGWEISFIPKDNDGGMTAQL PSTINSFVQTSLRPGEEYTVNLVALRDQGRSQPVTATFTTLIDGPTQLIVRDVSDTVAFV EWTPPKAKIDQIVLRYGLLGGEGPRTTFRLQPTLRQYSLQVLRPGSRYEVSVSGVRKGNE SGSISTQFTTALSFFSEIDAPKNLRLVSKTSTTLELEWDNSEAEVDAYQVVYSTLAGDQY DKVIVPRNGGATTKTTLTDLLPGTEYGIGISAMKGSNQSTPATMNARTGLDEPMDLTVTA STDKTITLVWGTVQGPIDLYKVTYTSSSGATSELTVPKDVTSTTLTDLEPGTEYTITVAA RRGRQQSNAATIDAFTGIRPVTHLYLSEVTSDSVAVAWSAPAPPADLFILSYSSADGTDT SKVTLDGSKTRSLVQGLLPSTHYTVSLITIQGEATSEPITASLVTGMDPPKELTVLDVTE DVVTINWIKPLAPFEYYKLSYQSARGRVDSVMIDSDVTNYTLSSLFPATEYEISLSAVRG SQESKVVSTSVFTAMDMPAELTALNITPQGALLRWKPPVSNVDNYVLTVTHNQVTADTFL VEGSKQEHQLSNLKPITTYSVALYATKGPLTSGTVITNFQTPMDAPVNLTASEVNHRSAL ISWQPPLAEIDNYMLTYRSSDGSRKELILDAEDMWIRLEGLAETTEYTVKLQAARGLDTS AVVSTTFTTGSRLFATPQNCAQHLLNGETLSGVYTIYINRDPSQGVQVYCDMSTDEGGWI VFQRRQNGLTDFSRKWSDYRVGFGNLEDEFWLGLDNIHRIASQGRYELRIDMKDGQESVY ANYDKFSIGDARNLYKLRIGEYNGTAGDSLSYHQGRPFSTKDRDNDIAVTNCALSYKGAW WYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSIPFVEMKMRPFNFRSISSKRRRSTSV NT seq 4143 nt NT seq  +upstreamnt  +downstreamnt atgcaactggctacgatgtcagcaacaacctggatcctggctgtggccttgcttcttgct atgcagggcgctgctcacgctgctccatcaggagacaacaagcttgttcgaaccagccga gtgaggaggcagaccccagggggggatcagcctccctctgcttcctcaaccaaccagacc ctgaaggaacaacctttgatctttaaccatgtctacaacatcaatgtacccttggagtca ctgtgttctgttgacctggacgcctctgcagcagcagccccagattccaatgcagagtta ggatccagaccgtcagcggagggtccaatggatccaaatagatctggaccgacagaattc actgagcagacgctggatgctgacagccaggtcacatttactcatcgcatcaacatccca aaagcagcatgtggatgtccagcaacaatggccatccagcagttagccacgagagtggag atgctggagcgagaagtgtccatgctccgagctcagtgtggatctggatgttgtggagag agttctgcaatggggcatctggacttcgtcccgggctgcagcggtcatggaagcttcagc tttgatctgtgcggctgcatctgtgaggaaagttggaccgggaagaactgctctgagccc cgctgccccaacgactgctccggtcagggcgtgtgcatcgaaggggagtgcgtgtgcgac cgtgacttcggcggggacaactgctcggagccgcgctgcccttcggactgctcgggccgc ggcctgtgcatcgacggggagtgcgtgtgcgaggagtccttcacgggggaggactgcatg gttgggaggtgtctcaacgactgctcggatcagggcctgtgcgtcaacgggacgtgccaa tgccgacccggttacgtgggcgaagactgctccatggtctactgcgccaacaattgcagt aagaagggaatctgcaaagagggtttctgtgtgtgccaagatggcttcgccggagatgac tgcaactctgtggctccagccatgaacctgaacgtgcgaggggtaacggatcacaccatc gacctggagtgggaagggtcggtcatgatcacagatttcttagtgacctacacaccaagc acaccaggaggtgtgcagctggaaatcagaattcctgggaacgccacaagctgctccatc tcagggctggaggcaggcttggagtacaacatcaatgtgtttgctgtcatcaacaacacc atcagcattccagccagcatcactgtgtggacctatctctccaatcctgatggtttgctc ttcaaatccatcacagagacgtcagtggaggtccagtggaatcccttttattattccttt gacggatgggaaatcagcttcatccccaaggataatgatggagggatgactgcacagttg ccaagcactatcaattcatttgtacaaaccagtctgagacctggagaagaatacacagtt aacctggtggcgctcagagaccagggtcgaagtcagcctgttaccgctactttcacaaca ctgattgatggtcctacccagctgattgtgcgggatgtgtcagataccgttgcatttgtg gagtggacgccaccaaaggcgaagatagatcagattgtgttgcgctatggtcttttggga ggagaggggccacgaaccacatttcgtctccaaccaaccctgagacagtactctctacag gttctccgtcccggctcacgatatgaggtgtctgtgagcggagtaaggaaaggaaacgag agtggatctatttccacccaatttacaactgctttatcgttcttctcagagatcgatgcc ccaaagaacttacgactcgtatccaagacctccaccacgcttgagcttgagtgggataac agtgaggctgaggtggatgcctaccaggtggtctacagcactttagcaggagaccagtat gataaagtcatcgtacctcgcaatgggggtgcaacaacaaaaactaccctcacggatctg ctgccaggcacagagtatggaattggcatttctgccatgaaaggcagcaaccagagtaca ccggcaacaatgaatgccaggaccggtttggatgaaccaatggatctgactgtgacagct tcgactgacaagaccatcactctggtgtggggcacagtccagggtccaatcgacctctac aaggtcacctacacatcttcctctggcgccacttcagagctgacagtccctaaagacgtg accagcaccactctgacagacctggagccaggaaccgagtacaccattaccgtagcagca aggagaggaagacagcagagcaacgcggctaccatagacgccttcacaggaatcaggccg gtaacccacctctacttatcagaggtgacttcggactcggtggcggtggcttggagcgcc cccgcaccgcccgctgacctcttcattttgagctacagttctgctgacgggactgacacc tctaaggtgacgctggatggctccaagacaaggtcactagtccagggcctgctgccgtcc actcattacaccgtcagtcttatcacaattcagggcgaggccacctctgaaccaattaca gcgtctctcgttacagggatggatccaccaaaagagctgacggttctggatgtgacggag gatgtggtgaccatcaattggatcaagccgctggctccatttgaatactacaagctctcc taccagtcagccagaggtcgggtggacagtgtgatgattgacagcgatgtgacaaactac accttgtccagtctgtttcctgccacggagtatgagatcagcctcagtgctgtcagagga agtcaggagagcaaagttgtcagcacatctgttttcacagctatggatatgcccgcggag ttaacagctctcaacatcaccccgcaaggagctttgttacggtggaaaccgccggtgtcc aatgtcgacaactatgtgctgacagtcacacacaaccaggtcacagctgatactttcttg gtggaaggcagcaaacaggaacaccagctttctaatctgaagccaatcaccacctactct gtggctctctatgccactaaaggacctctaacaagcggcactgtcatcactaactttcag acacccatggatgcacccgtgaacctgacagccagtgaagtaaaccaccgcagcgctctc atttcatggcaaccaccacttgcagaaattgacaactacatgctcacctacaggtcatct gatggcagccgcaaggagctgatcctcgatgcagaggacatgtggatcaggttggaggga ttggctgagactacagaatacactgtcaagctgcaagctgcaagaggacttgacaccagc gccgtcgtttccactacttttactacagggagtcgactgtttgcgactcctcagaactgt gcccaacacctgctgaacggcgagacactgagtggcgtctacaccatttacatcaacagg gaccccagccagggtgtgcaggtgtactgcgacatgagcacagatgaaggaggctggatt gtctttcagcgtcgtcagaatggcctgactgacttttccaggaagtggagtgactaccgg gttggttttgggaacttggaggatgaattctggcttggtcttgacaacatccacaggatt gcttctcaaggtcgatatgagctgaggatcgacatgaaagacgggcaggagtcggtctac gccaattatgacaagttctcaattggagatgcaagaaacctctacaagctcaggatagga gagtacaacggcactgctggcgactctctgagctaccaccagggccggcccttctccacc aaagaccgagacaatgacatcgctgtcactaactgtgccttgtcttataaaggagcttgg tggtacaagaactgccaccgggccaacctcaatggcaaatatggcgagtccagacacagt cagggtatcaactggtaccactggaagggccacgagttctccatcccatttgtggagatg aagatgaggccgttcaacttccgtagcatcagcagcaagaggagacggtccacttctgta taa

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