KEGG   Oryzias melastigma (Indian medaka): 112147357
Entry
112147357         CDS       T07439                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    112147357
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112147357
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oml03021]
    112147357
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112147357
Transcription machinery [BR:oml03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     112147357
    Little elongation complex (LEC)
     112147357
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing A_deaminase_N Angiomotin_C
Other DBs
NCBI-GeneID: 112147357
NCBI-ProteinID: XP_024129455
Ensembl: ENSOMEG00000012322
UniProt: A0A3B3BZD2
LinkDB
Position
LG22:complement(9481666..9493724)
AA seq 616 aa
MSVLEEDRCYGLRSGNEVSPARNQSVFHVKLTDSAAKAIGCLQNGKGLVLHPSICFNGNQ
GRITIPCSDSKDEVRIFTFSVTNVARSSPHGSFDCVRQLSNGAAEELSCLGVIQKKMTIN
ATDDSYDKARQSMAQAEEETRSRSTIVIKNGGRYQGKKVTVRAPAPALAKLTKPKHSSHS
LLSNIRRRISVSKKSPCPSNRKNADVVQRPLRERIMHLLALRPYKRPELILRLQRDGLTG
EEKDGLESALSEVAQLSGRDNTFVLKDTLYKDLRKDWPGYTPGDQQLLKRVLVRRLFQPQ
QNLLTVPEAQVSPLRDTPNSSPAHRFKHSLVEDFPDVSSSKKPRISRLSNKSSCKRSLLK
PPEQEDQRDTEGIAKAERWNSLDAEKLLDSLLATSTEETAERLEPVESAPQASEGHSTPQ
PHRSPSPLTASDLQCADRKGKEREKLKHILEGWRTKKDRRKDQGSGDASTNASQACTELN
EMTFVKESDDAEAYTDTPDYLSKYTSICSHSQRQSYKQDFNKEYSEYRDLHARIDHTTRQ
FLELESQLKQLHHGSLKYKTVHNKILQKYRKIKKSNPSYNQDKVRCEYLHNKLAHIKKLI
SDFDQQQLTADRSCPE
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgtcggtgctcgaagaggaccggtgttacggtctgcgcagcgggaacgaagtgagcccc
gccaggaaccagtcggtttttcacgtaaaactcactgacagcgcggcgaaagctatcggc
tgtctccagaacggcaagggacttgttcttcatccaagcatctgttttaacggaaaccaa
gggagaatcacaatcccttgttcggacagtaaagacgaagtgaggatctttaccttcagt
gtgaccaacgttgcgcggagcagtcctcatgggagctttgactgcgttaggcagctcagc
aatggagctgccgaggagctgtcatgcctgggagtgattcagaagaagatgactatcaac
gccactgatgactcgtacgacaaagctcgccagagcatggcccaagccgaggaggagacg
cgcagccgaagcaccatcgtcatcaagaacggaggacgctaccaggggaagaaggtgacg
gtgcgagcgcccgctcctgccctggctaagctgaccaaacccaagcactcttctcactcc
ctcctgagcaacataaggaggcgcatcagcgtgtcgaagaagagcccctgcccgtctaac
aggaaaaatgccgacgtggtgcagaggcccctcagagagaggatcatgcatttgctggct
ttgaggccgtataagagacccgagctgatcctgaggctgcagagagacgggctgacgggg
gaagaaaaagacgggctggaatctgcactatcagaggtggcccagctcagcggcagagac
aacacttttgttctgaaggacactttgtacaaagatctgcggaaagactggccaggctac
acgccaggagaccagcagcttctgaaacgcgtccttgtcaggaggctctttcaaccccag
cagaacctcctcacagtccccgaggcccaggtcagccccctgcgggacacccccaactcc
tccccagcccaccgtttcaagcactccctggtggaggatttccccgacgtttccagcagc
aagaaacctcggatatcccgcctgtcaaacaaatcctcctgtaaaaggtcgttactgaag
ccgcctgaacaggaggaccaaagagacactgaagggatcgccaaggccgagcgctggaac
tcgctcgacgctgaaaaacttttagactcgctgttagcaacttctaccgaggaaacggct
gaaaggctggagccggtggagtcggctccacaggcctctgaaggtcactccaccccccag
ccccatcgatccccctcccccctgactgcatccgacctgcagtgtgccgatcgcaaaggg
aaggaaagggagaagctcaaacacatcctagaggggtggagaacgaagaaagacagaaga
aaagatcagggttcaggagatgcgagcaccaacgcctcccaggcctgcacagaactgaac
gaaatgacgtttgtgaaagaatcagacgatgcagaggcttacacagacacgccggactat
ttatcaaagtacacgagtatttgcagccacagtcagagacagagctacaagcaggacttc
aacaaggagtacagcgagtacagagacctgcacgctcgcatcgaccacaccacgcggcag
ttcctggagctggagtctcagctcaaacagcttcatcacggctcactgaaatacaagact
gttcacaataaaatccttcagaaatatcgcaaaatcaagaagtctaatccgagctacaac
caggacaaagttcgctgtgagtacctccacaacaaactggctcacatcaagaagctcatc
tcagacttcgaccagcagcagctgactgcagaccgctcgtgccctgaatga

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