Oryzias melastigma (Indian medaka): 112147402
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Entry
112147402 CDS
T07439
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oml03041
]
112147402
Spliceosome [BR:
oml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
112147402
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
112147402
NCBI-ProteinID:
XP_024129523
Ensembl:
ENSOMEG00000016950
UniProt:
A0A3B3CBT0
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Position
LG17:19502879..19527247
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AA seq
543 aa
AA seq
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MLSASKCAKISADRRGQRAAMDGDVAVGVKRGSDELNMYSSSPSSMTANGSDSKKQRLDE
SPPSRVLHIRKLPNEVTETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYY
TAVTPQVRNTPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQDGSSPSSDPGVLELAPP
PSPVLRIIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKL
SLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPTGDGDSANKDHSLLGTPS
GALASYSSGGSYSSSLSLSQGGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNEE
MVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVT
LSKHQTVALPREGLDDQLLTKDFAGSPLHRFKKPGSKNFQNIFPPSATLHLSNIREGVGE
EDLRLLFSNSGGAVKAFKFFQDRKMALIQMSSVEEAIQALMDLHNYDMGGNHHLKVSFSK
STI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgcttcgaagtgtgcgaaaatatcagcagacagaagaggacaaagagctgca
atggacggtgatgttgcagttggtgtgaagagaggctcagatgagctcaacatgtacagc
agcagccccagctccatgaccgcaaacggcagcgacagtaagaagcagcgcctcgacgag
tcccctccctccagagtccttcacatcagaaaacttcccaatgaagtgacggagactgaa
gtcatcgctctgggcctgccgtttggaaaggtcaccaacatattgatgctgaaggggaaa
aatcaggcttttcttgagttgggtacagaggaagcagctattaccatggtcaactactac
accgctgtcacaccgcaggtcagaaacactccagtcttcatccagtattcaaaccacaag
gaactgaaaacagattcagctctgaaccagagagcccaggcagtcctgcaggcggtgtca
gccgttcaggatggcagctctccatcctccgaccccggagttttggagctggctccgccc
cccagtcccgtcctgcgaattatcattgacaacatgttttatcctgtcacactggatgtt
ttacaacagatcttcagcaagtttggtactgtgatgaagatcataactttcaccaagaat
aaccagtttcaggctctgctgcagttcagcgatcccgtcaatgcacagcaggctaaactg
tctttagatggacaaaacatctataattcctgctgtactctacgaatagacttcagtaaa
ctggtcaacctcaacgtcaaatacaacaatgacaagagtcgggattacaccagacccgac
ctcccgacaggagacggagattcagccaacaaggatcactctctgctgggaaccccatct
ggtgcgcttgcttcctactccagtggaggaagttactcctcttctctgtcactctcacag
ggtggaggagccatcagtcctctgagcgctgcggcggcggcagcagcagctgcaggtcgt
gtcgctttgtccgggtctggagtgtccggggtcctgctggcttccaacctgaatgaagag
atggtcacgcctcaaagtctctttaccctcttcggggtctacggggacgtgcagagggtg
aagatcctctacaacaagaaggacagcgctctgatccaactttctgacgggaaccaggct
cagctcgccatgagtcacctcaacggtcaaaaggtttttggtaaagtcatgagggtgacg
ctatcaaagcatcaaacagtcgctttgcctcgagaaggactggacgaccagctgctcact
aaagattttgccggctccccactccatcgcttcaagaagcctggatccaaaaacttccag
aacatctttcctccgtctgcaactcttcacctctccaacattagggagggagtgggggag
gaagacctgcgtctactgttttctaacagcgggggagcggtcaaagccttcaagttcttc
caggaccgtaagatggctttgatccagatgtcttcagtagaagaagccatccaggctctg
atggaccttcataactacgacatgggaggaaatcatcatctcaaagtttccttttccaag
tccaccatctaa
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