Oryzias melastigma (Indian medaka): 112147420
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Entry
112147420 CDS
T07439
Symbol
gigyf2
Name
(RefSeq) GRB10-interacting GYF protein 2 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112147420 (gigyf2)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112147420 (gigyf2)
Surveillance factors
Other surveillance factors
112147420 (gigyf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
DUF1477
Motif
Other DBs
NCBI-GeneID:
112147420
NCBI-ProteinID:
XP_024129556
Ensembl:
ENSOMEG00000003406
LinkDB
All DBs
Position
LG17:9454405..9478594
Genome browser
AA seq
1342 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGGGGVGSGSSSSGGVSNNAVASPPLSPALPKYKLADYRYG
REEMLALYVKENKIPIDLHDKEFLPILQEEPLPPLALVSFTEEEQRNFSMSVNSAAVLRL
SVRGGGPIAGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGFGRGGREMHRSQSWEERGDR
RFEKPGRKEPDAASGHFQINHIRSNYEEGGAVLPRKHDFTRSESENWRTSRDDQNGEDDD
GGWRPAGSRRDSDRWCPQSPDGPRSAGWRDHPDQRRRFPFDAREDERGYRRPRSGSSSME
DERDSLPEWCLEDADEEAGTFDSSGAFLSLKKAPKEPIPEEAELEFKPLEECEESLEDDS
PLSETKETENEAKREAERKELAKASEEAPPIIPPVPPTVLESHPPAQCYPSILPNRTEEM
ERPAEKQQPLEIPPEPCKPPLRVPITSSMLESLPMTHVSTSMSEASVPSSVAKLPQKKSI
EVPVAMNNPLPFPSNVMAPIARPTSVPHDTDEDGLKNFEQEAEKMVAYLHDSGVDEDRLA
AKTAEKPKPAGLPLTHEAALKWLYKDPQGEIQGPFSNQEMSEWFQAGYFTMSLLVKRGCD
EVFQPLGEIMKIWGRIPFTPGPSPPPLQSDGDQERLKRQQELTALNLYQLQQLQYQYLLR
QQYAQALAQQKAAVLSSAPLQQQQQHQQQINLLLQQYQALKIRASENFLPPVTRSPSVPD
TGSVWEMQNPSSQASCTANLQPAPPSTWDGSSVWDLPIDSVAQAPTIEQMQQFEKAKSAK
LELERRDAEMRAKREEEDRKRLEEALRARQEEERKRLEEEELARQKQEEALRRQREQEEA
QRRQKEDEERRAQEEALRRLEEKRREEEEKRKREELLRKQEEERRKQEELEALRRREEEK
RAEEEAAAAAALAQQQEEQRRREQELQRQQEVQRQQELQRQRQQQQEALRRLQQQQQLAQ
MKLPSSSKWGQQSASSINQAHNALSLAEIQKLEEERERQTREEQRRQQQELLKLQQQQQA
ALQQAQQTHAKMSGWGNVAKQPVVTKSLLEIQREEAQQMKQRKEQHQHQQHPVSTQQTRP
QNRAVSLSNSVWGSVNPTTNWGSDSSSIWGDTHNSNMGFWDEAVKEAVPPPQQQQQPPPP
PPPQAKKTNSQKNNKGNANISNSLSGRASKKVDEEEKLVKLFQGVNKSQQDTFMQWCEQT
LHTLNTANNLDVPTFASFLKEVESPYEVHDYVRAYLGDTSEAKDFAKQFLERRAKQNTNQ
QKPAQNQQQTLKQQQDSVWGGTSSLYQSNHTADQTQRFETVTSGKKKKKQKMVRADPSIL
GFSVNASSERLNMGEIETLEDF
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaacccagacacttaactttggacctgaatggcttcgtgccctttctggaggc
gggggcggcggcgtcggcagcggtagtagtagtagtggtggtgtaagcaacaatgctgtt
gcttctccacctctctcacctgcattgccaaagtataaacttgcagactatcgctacggg
agagaagaaatgttagcactttatgtaaaggagaacaagatccctatagacctacatgat
aaggagtttctacccatattgcaagaggaacccttgccacctctggcacttgtgtctttt
actgaggaagaacagagaaatttttccatgtctgtaaacagcgcagcagtactccggctg
tcggtacgaggaggtggaccgatagccggagcaccgagagggcgaagtacatcaagaggt
cgagggaggggaagaggggatggaggtttttaccaaagaagttttgatgacgtggaaggt
tttggccgtggagggagggagatgcatcgctctcaaagctgggaagaaaggggagacagg
aggtttgaaaagccaggtcgaaaagagccagatgctgcttcaggacattttcagattaat
catatccggagcaactacgaagagggcggggccgtactgccgaggaagcacgacttcacg
cggtcagagagcgaaaactggcgcacgtctcgcgatgatcaaaacggtgaggatgatgat
gggggctggcgcccggcgggttctcggcgggacagtgaccggtggtgcccccagagccca
gatgggcctcggtcagcaggttggcgggatcacccggatcaacgtcggcggttcccgttc
gatgctagggaggacgagcgcggatacagacggccgcgatctggcagcagcagcatggag
gacgagagggacagtttaccggagtggtgtctggaggatgcggacgaggaggccggcacc
tttgactcctcgggggcttttctttctctcaagaaagctccaaaggagcccatcccagag
gaggcagaactggagtttaagcctctggaagagtgcgaggagagtttggaggacgacagt
ccgctcagtgagaccaaagagacagaaaacgaggcgaaaagagaagctgagagaaaagag
ttggccaaagcttcagaggaggctccgcccatcattccacctgttcctcccacagtgttg
gagtcccacccccctgcacagtgttatccttcgatcctgcccaacagaacggaggaaatg
gagcggccagccgagaagcagcagcctctggagatccccccggagccctgcaagcccccg
ctgcgagtccccatcaccagcagcatgctggagtctcttcctatgacccacgtttccaca
agcatgtcagaagcttccgttccatcatctgttgccaaactccctcaaaagaagtctata
gaagttcccgtggccatgaacaatcctttacctttcccttcaaacgtaatggcacctatc
gccaggcccacctctgtgccacacgacacggatgaagacggactcaaaaactttgagcag
gaggcagagaagatggttgcgtatctgcacgacagcggcgtggatgaagaccggctcgca
gcgaagacggcagagaagcccaaacctgcaggcctgcctctcacccacgaagctgctctt
aaatggctttacaaagatccgcagggggaaatacagggtccgttcagtaatcaagagatg
tctgaatggtttcaggccggttacttcaccatgtctctgttggtcaaaagaggttgtgat
gaagtatttcagcctctgggagaaatcatgaagatttggggaaggataccgttcactccg
gggccctcccctcctccattacaatcagatggtgaccaagaaaggttgaagcgtcagcag
gagctcacggccctcaacctgtaccagttacagcagctacagtatcagtacctcctcagg
cagcagtacgctcaggctctggcccagcagaaagctgcagttttaagctccgcccctctt
cagcagcaacagcagcaccaacagcagatcaatctgctactacagcaataccaggctctg
aagataagagcgtctgagaactttctacctcctgtcacccgatccccatccgtaccagac
accggttctgtgtgggaaatgcagaacccttcctctcaggcttcctgcacagcaaacctc
cagccggctcctccaagcacgtgggacggcagcagtgtctgggatttacccatagactcc
gtggctcaggctcccaccatcgagcagatgcagcagtttgagaaagcaaagtctgcaaag
ctggagctcgagaggcgggatgctgagatgagagctaaaagggaagaagaagacaggaaa
cgcctggaggaggccctcagagctcgacaggaggaggagcgcaaacgtttggaggaagag
gagctagcacggcaaaaacaggaggaggcactaaggcggcaacgagagcaggaggaggca
cagcgcaggcaaaaagaggacgaggagagacgggcacaggaggaagcgctccgaagatta
gaggagaagcgcagggaggaggaggaaaaacggaaaagagaagagctgcttcgcaagcag
gaagaggagcgcagaaaacaggaggagctcgaggcgttgaggaggcgcgaggaggagaag
cgggcggaggaggaggcagccgccgccgcagctttagcacagcagcaggaggagcagaga
agaagagagcaggagctgcagagacaacaagaagtgcagaggcaacaggagctgcagaga
cagaggcagcagcagcaggaggccctccggaggctgcagcagcagcagcagctggcacag
atgaaactcccatcatcctctaagtggggacagcagtcagccagcagcatcaatcaggct
cacaatgccctgtctctggctgagatacagaagctggaggaggagagggaaaggcagacg
cgggaggagcagcggcgtcagcagcaggagctcctgaagctgcagcagcagcagcaggcg
gccctgcagcaggcccagcagacccacgccaaaatgtccggctgggggaacgtggccaag
cagcccgtcgtcaccaagtctctgctggagattcagagggaggaggcgcagcagatgaag
cagaggaaggagcagcaccaacaccaacaacaccccgtctccacccagcaaacccgacca
caaaacagagctgtgtcgctgagcaactcggtgtgggggtccgtgaatcccaccaccaac
tggggctcagactccagcagcatctggggggacacccacaattcaaacatgggtttctgg
gacgaggctgtgaaggaggccgtcccgcctccccagcagcagcagcagccgccgccgccg
ccgccgccacaggccaaaaaaaccaactctcagaaaaacaacaaggggaacgccaacatc
agtaactctttgagtgggcgggccagcaagaaggtggacgaagaagaaaagctggtgaag
ttgtttcaaggggtcaataagagccagcaggacacgttcatgcagtggtgcgagcagact
ctgcacacgctcaacacggcgaacaatctggatgttcccacgttcgcatccttcctgaag
gaagtggagtctccatacgaggtgcacgactacgtcagggcctacctcggagacacttcc
gaggccaaggacttcgccaagcagttcctggaacgccgtgccaaacagaacactaaccaa
cagaaaccggcgcagaaccaacagcagaccctcaagcagcagcaggattctgtgtgggga
ggaacctcatcactgtaccagtccaaccacacggctgaccagacgcagcgcttcgagacc
gtcacctcagggaagaagaagaagaaacagaagatggtccgagcggatcccagcatttta
ggtttttctgtgaacgcgtcgtctgagaggctgaacatgggagagatcgagactttagag
gacttttaa
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