Oryzias melastigma (Indian medaka): 112147503
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Entry
112147503 CDS
T07439
Symbol
wdr47a
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112147503 (wdr47a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
112147503 (wdr47a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
LisH_TPL
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SCAP
TPR1-like_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
eIF3h_C
Vir_act_alpha_C
Motif
Other DBs
NCBI-GeneID:
112147503
NCBI-ProteinID:
XP_024129734
Ensembl:
ENSOMEG00000022386
LinkDB
All DBs
Position
LG17:11727552..11740044
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AA seq
917 aa
AA seq
DB search
MTAEETINVKEVEIIKVILDFLNSRKLHISMLALEKESGVINGLYSDDMLFLRQLVLDGQ
WDEVLQFIQPLECMDTFDRKRFRYIVLKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVKC
LHSLEEFCPSKEDYSKLCLLLTLPRLTNHAEFKDWNPSTARVQCFEEACTMVAEFIPADR
KLSEAGFKASRDRLFQLLLKGVLYECCVEFCQSKATGEEITESEVLLGVDMLCGNGCDDL
DLSLLSWMQNLADTVFSCAFEQKQLNIHVDRLVKPAKTGYADLLTPLISKLSPYTTSPLR
RPQSADTYMSRSLNPALDGLSYGLSGQDKRASGGETAPGKGISPMSHSFANFHYPGAAGQ
SLSRSLMMESADCHRIFEESPETSRTDTPVDKMMGSDGSQNARPASAPGEDAPLAGCTDS
NELRDSTEKYEEYYRQRLRVQQHLEQKQQQRQMYQQMLLEGGVQQDPPPADMQHSLTEKF
LNRSIQKLEELNVGMENIGEEVKSLAQQCNGNGNTPTSEDNNNPPSVTPEQGRPRGGGVL
SSTPQRTVGGRVIPPPNESPVVSQSGQKPKAEKQGDSPGSLSRSKEGEKPKDLFVPVHSL
EDTQAVRAVAFHPSGALYAVGSNSKTLRVCAYPDSLDTSRSSSSLKQPAVRFKRNKHHKG
SIYCVAWSPCGQLLATGSNDKYVKVLPFSAETCNATGPDLEFSMHDGTIRDLAFMEGPES
GGAILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILSLYTWGGWMIASGSQDKTVRFWD
LRVPSCVRVVGTAFHGSGSPVASVAVDPSGRLLATGQEDSACMLYDIRGGRIVQVYRPHG
SDVRSVRFSPGAHYLLTGSYDTKVIVTNLQGDLTKQLPLTVVGEHGDKVIQCRWHPQDLS
FLSSSADRTVTLWTHNP
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggaagaaaccatcaatgtgaaggaagtggagataatcaaggtgatcctggac
tttctaaactccaggaagctccacatcagtatgttagctctggaaaaggagagtggggta
atcaatggactttattctgatgacatgctctttctcagacaactggtcttggatggtcag
tgggatgaagttttgcaattcattcagcctttggaatgcatggatacctttgacaggaag
aggtttcgttacattgtcctgaagcaaaagtttcttgaggctctatgtgtgaacaatgcc
atgtctgcagaagatgagcctcagcatctggagtttaccatgcaagaagcagtcaagtgc
ctccattctctcgaggagttctgcccctctaaggaagactacagcaaactgtgtctgctc
ctcacactgcctcgcctcacaaaccacgcagagttcaaggactggaaccccagcacagcc
agagttcagtgttttgaggaggcgtgcaccatggtggcagagttcattccggctgacagg
aagctgagcgaggccgggtttaaggccagcagagaccgactcttccagctgcttctgaaa
ggagttctgtacgagtgctgtgtggagttctgtcagagcaaggcgacgggggaggagatt
acagagagtgaggtgctgctgggagtcgacatgctgtgtgggaacggttgcgatgacctg
gacctgtccctgctctcctggatgcagaacctcgccgacaccgttttctcctgcgcattc
gaacaaaagcagctaaacattcacgtggaccgcctggtcaaacctgctaagactggctac
gctgacctcctcactccgcttatcagcaaactctcgccatacaccacctcccctctccgc
cgccctcagtctgctgacacctacatgtcgcgctccttaaacccggcgctcgatggactc
tcttatgggctgtccggtcaagataagagagcaagtggtggagagacagctccaggaaaa
ggaatctctcccatgtctcactcgtttgctaatttccattatcccggagcagcggggcag
agcctgagcaggagcctcatgatggagagcgccgactgccatcgcatctttgaggaatcc
cctgaaacgtccagaacagacacacctgtggataagatgatgggctcagatggatctcag
aacgcgcgtcctgcttccgctccaggcgaggacgccccgttagctggctgcaccgacagc
aatgagctccgtgactcgacagagaagtacgaggagtattaccgccagcgtctccgcgtc
cagcagcacctggagcagaagcagcagcagcgacaaatgtaccagcagatgttgctggag
ggaggcgtccagcaggaccccccgcccgccgacatgcagcacagcctcacagagaagttc
ctcaacaggtcgatccagaagctggaggagctcaacgtggggatggagaacattggcgag
gaggtgaagtctctggcccagcagtgcaacggcaacgggaacacccccacctccgaggac
aacaataaccctccatctgtgactccagagcaggggcgcccccgagggggaggggtgctc
agcagcaccccgcagcgcaccgtcggaggccgggtaatcccgcccccaaatgagtccccc
gtagtttctcagagtgggcagaaacctaaagccgaaaagcaaggtgactcccctggttct
ttgtcccggagtaaagagggtgaaaaacccaaagacctgtttgtgccggtgcactctttg
gaggacactcaggctgtccgagctgtggcgtttcacccgtctggagctctgtacgctgtg
ggttccaactccaaaaccctgcgtgtgtgcgcttatccagactccctcgacacaagtaga
agctcaagttcacttaaacaaccggctgttcgcttcaaaaggaacaaacaccacaaaggc
tccatctactgtgtggcctggagtccctgtggacagctgttggccacaggctccaatgac
aaatacgtcaaagtcctgcctttcagtgcagagacgtgcaacgctacaggaccagacctg
gagttcagcatgcatgatgggaccataagggacctggccttcatggaggggccagaaagt
ggaggtgccatcctgatcagtgctggagccggagactgtaacatctacaccaccgactgc
cagagaggacaggggctgcacgcgctcagtggacacacaggtcacatcctgtctctgtac
acatggggaggctggatgatcgcttctggctctcaagacaagacggtgcgcttctgggac
ctcagggtcccgagctgcgtgcgagtcgtaggaaccgccttccacggctcaggcagtccc
gtggcgtctgtcgcagtcgatccgagtggccgtctgctagcaacaggacaggaagacagc
gcctgcatgctgtatgacatcagaggcggtcggatcgttcaggtgtaccgtccgcacggc
agcgacgttcggtccgttaggttttcccccggagcgcactacctgctgacggggtcctat
gacaccaaagtcatagtcaccaaccttcaaggtgacctgaccaaacagctgcctctgact
gtagtgggagagcacggagacaaggtgattcagtgtcggtggcacccgcaggacctctct
ttcctctcgtcttctgctgaccgcaccgtcacactgtggacacacaacccctaa
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