KEGG   Oryzias melastigma (Indian medaka): 112147513
Entry
112147513         CDS       T07439                                 
Symbol
kdm4ab
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oml03036]
    112147513 (kdm4ab)
Enzymes [BR:oml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     112147513 (kdm4ab)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     112147513 (kdm4ab)
Chromosome and associated proteins [BR:oml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112147513 (kdm4ab)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 JmjN zf-HC5HC2H PHD_2 PHD Rad9_Rad53_bind PHD_4 DUF7141 Tudor_5 LBR_tudor
Other DBs
NCBI-GeneID: 112147513
NCBI-ProteinID: XP_024129745
Ensembl: ENSOMEG00000005643
LinkDB
Position
LG17:26478275..26503671
AA seq 1129 aa
MASDMVSPNHGSKGIMTFYPTAEEFKNFNRYVAYIESKGAHKAGLAKIVPPKEWRPRRSY
DDIDDLVIPAPIQQVVTGQSGLFTQYNIQKRSMTVREFRKIASSDKFCSPRYDDFDELER
KYWKNVTFNPPIYGADVNGSLYDPNIKEWNICHLGTILDTVEHDSGITIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGQPKSWYCISPEHGKRLERLAKGFFPGSSQNCEAFLR
HKMTLISPSILKKFGIPFDKITQEAGEFMITFPYAYHAGFNHGFNCAESTNFATERWIEY
GKQAVLCSCRKDMVKISMDVFVKKFQPDRYEQWLAGRDVAPIDHSQPTPEAQEFLDESFC
DVSQSRSSSSSDRYGEDGEKRSTQRIETKRHRVCLEVPSDVALKQEDDPPQYGKRPRLSL
IPPRPAVHDGKKNKGPPKLVVTPTKLTLMDPFHRALTQSTCGGCRAPHYSKTRALTIPCQ
SNSRNGHLAVPAAPVRTQGPAPAVRKMGVASLLFHRTLSPKDTLQVHSYTLESQRRPPTQ
LQVHSYAREHQARHLQHKTCTPSQVQQVSAPSSCEATEPRPEGAEMLTNVVKKEPDARSP
SVQKQGEAAEEDTPTDQLPRKPDPSTAQTQLPHKTKTQAFRAHNQQQVSEEQSYCKSVAK
KQHEGTLLPKLPRQHPLIREDIEEDVHLALVGDLKEKEEWAKPLTQLWQSRLFNPQAERE
YNQWVGLQAPYCSICLLFHTYHQSESDNGVVVKRSRGRLWSKPLIPEMCFNTQSNKCNDG
GQGQLSNPNVEEDGTSRLVSCAQCCVRVHTSCYGVSADEEDLDDWRCARCEANALTEDCC
LCSLRGGALQRANNDKWVHVLCAITVLEARFVNITRRSPIDLSAIPLPRFRLKCVYCRKR
MKREVKGCCVQCSHGRCSTAFHPTCAQAAGVLMHPDDWPFVVFITCPRHRAPIMPERDKN
SMKEVSAGQKVICKHKNSRYYHSDVVELTTATFYEVVFDDGSYSNNLFPEDIENRDCVRL
GPPAKGEAVQVRWTDGLIYGAKFVTSHSIPMYLVEFEDGSQISVKREDIYSLDEDLPKRV
KSRMSVASDMRFELFNQKEVKQNAKRQRVINSKYREDYIEPVIYRAIME
NT seq 3390 nt   +upstreamnt  +downstreamnt
atggcgtccgacatggtttctccaaaccatggttccaaggggatcatgaccttttacccc
acagctgaggagttcaagaacttcaaccgttacgtcgcgtacatcgagtccaagggagct
cacaaagcaggcttggctaaaattgttccaccgaaggagtggaggcctcgcagatcgtac
gacgacattgacgatctagtgattccagcaccaatccagcaggtggtgacgggccagtcg
ggcctttttacccagtacaacatacagaagaggtccatgaccgttcgggagtttagaaaa
atcgccagtagtgacaagttctgcagtcctcgttatgatgactttgacgaacttgaaaga
aaatactggaagaatgtgacctttaaccctcctatatatggagcggatgtgaacggatcg
ctgtacgatcctaatatcaaagaatggaatatttgccatttgggtaccattttggatacg
gtggaacatgacagtggcatcactatcgagggtgtcaacaccccctatttgtattttggc
atgtggaagaccactttcgcgtggcacactgaggacatggacctctacagcatcaattac
ttgcactttggacagcctaaatcatggtattgtatttctccagaacatggaaaaagatta
gagcgtctggccaaaggttttttccctggtagctctcagaactgtgaggccttcttgcga
cataagatgactctcatctctccttcgatcctgaagaaatttgggattccgtttgataag
attacccaggaggccggggagttcatgatcactttcccatatgcctatcatgctggcttt
aaccacggcttcaactgtgctgagtccaccaacttcgccacggagagatggatcgagtac
ggcaagcaggcggtgttgtgctcctgccgtaaggacatggtgaagatctccatggacgtg
tttgttaagaagttccagccagatcgctacgagcagtggctggcggggcgagatgtggct
ccaatcgaccactcgcagcccacgccggaggcacaggagtttttggacgagtctttctgt
gatgtcagtcaaagccgcagcagcagctccagcgacagatacggggaggatggagagaag
cgaagcactcagaggatagagacaaagcgacaccgggtgtgtctggaggttcccagtgat
gttgctctgaagcaggaagatgatcctccgcagtacgggaagcggccacgcctcagcctc
atacccccccgacctgctgtccacgatggcaagaagaataaaggtccgccaaagttggtc
gtcacgccgaccaagttgactttaatggatccgtttcacagagcgttgactcagagtacc
tgtggcggatgccgtgctccacattattccaagactcgcgcgctcacaataccgtgccag
tcaaactccagaaatggacatttggcggttccggcggctccagtgaggacacaaggcccc
gccccagctgttcggaaaatgggagtggccagcctgctctttcacaggacactgagtcca
aaagacacgctgcaagtgcacagctacactctggagagccagcggcggcctcccacgcag
ctgcaggtccacagctacgccagggagcatcaagctcgccacctccagcacaagacctgc
acgccgtcacaggtgcagcaggtgtctgcaccatccagctgtgaggcgacggagccccgc
ccagaaggcgccgagatgctgacaaacgtagttaaaaaggagccagatgcgcggagtcct
tctgtgcagaaacaaggcgaggcagctgaagaggacacgcccacagatcagcttccacgc
aaacctgacccctcaaccgcgcagacacaacttccacacaagacaaaaacacaagctttc
cgagctcacaatcagcagcaggtatcagaggaacagtcgtactgcaagtctgtagcaaag
aagcaacatgagggaactctactccccaagctgccccgccaacatcctctcatcagagag
gatattgaggaagacgtgcatttggctttagtgggtgacctaaaagagaaggaggagtgg
gccaagcctctcactcaactgtggcaaagccgactttttaatccccaggcagagagggag
tacaaccaatgggtcggtctgcaggctccgtactgctccatctgcttgctgtttcacaca
taccatcagtcggagtccgataacggcgtggtcgtgaagaggtcgagaggccgtctgtgg
tccaagccgcttattcctgaaatgtgcttcaacacccaatccaacaaatgtaacgatggc
gggcaggggcagctttccaaccccaacgtggaggaggacggaaccagccggctggtcagc
tgtgctcagtgctgcgtccgcgtgcacacaagttgctatggtgtatctgctgatgaggag
gacttagatgactggcgatgtgctcgctgcgaggccaacgccctcactgaggactgctgc
ctgtgttctctgaggggcggagctctgcagagagccaacaacgacaagtgggttcatgtg
ctgtgtgccatcaccgtgctggaagctcgctttgtcaacatcacccggcgttcccctatc
gacctctctgccatcccactgccccgcttcaggctgaagtgcgtgtactgcaggaaacgg
atgaagagggaggtgaagggctgctgcgtccagtgctcccacggccgatgttccacagcc
ttccaccccacctgcgcccaggcagccggcgtcctcatgcacccggacgactggcccttc
gtcgtcttcatcacttgtccccgacacagagcgcccatcatgcccgagcgtgacaaaaac
tccatgaaggaggtcagcgcgggtcagaaggtgatctgcaaacacaaaaattcccgttac
taccacagcgacgtggtggagctgaccacggccaccttctacgaggtggtgttcgacgac
ggctcgtacagcaacaacctgtttcccgaggacatcgagaaccgcgactgcgtccgcctc
ggccctcctgctaaaggcgaggccgttcaggtgcgctggaccgacggactcatctacgga
gccaagtttgttacatcacactccatccccatgtacctggtggagtttgaggacggatcc
caaatctcagtcaagagagaagacatctacagtctagatgaggacttacccaaaagagtc
aagtcccgcatgtcggtggcgtcggacatgcgcttcgagctcttcaaccagaaggaagtg
aagcagaacgccaagcggcagcgggtcatcaactccaaatacagagaggactacattgag
cccgtcatctacagagccatcatggaataa

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