Oryzias melastigma (Indian medaka): 112147682
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Entry
112147682 CDS
T07439
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112147682
Membrane trafficking [BR:
oml04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112147682
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_EndoS
Ig_2
LRR_LRWD1
LRR_9
LRRNT
LRR_6
V-set
Motif
Other DBs
NCBI-GeneID:
112147682
NCBI-ProteinID:
XP_024129992
Ensembl:
ENSOMEG00000020828
UniProt:
A0A3B3CMG5
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Position
LG17:12238823..12285778
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AA seq
622 aa
AA seq
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MTGFSGPGRCALVPWLKVWRWVLATSLVAGITLTLPGNSQACPPRCECSAQLRSVSCQRR
RLVNIPEGIPTETRLLDLSRNRLRWVQAGDLSPYPRLEEVDLSENLIATLEPNAFSALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDLRNLKHLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLRSLVSLHLRHLSIIALEDQNFRKLYS
LRGLEIDHWPYLEYISPLSFQGLDLHWLSITNTNITSVPSGSFKNMVHLTHLNLSYNPIT
TLEPWAFKDLLRLKELIMVSTGLVTVGPHALGGLRQIRVLNFSSNDLQTLEESSFHSVNS
LETLRVDDNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFTDSALFDHFT
CQKPRIRNRKMQKVVANEGQAVSFLCRADGEPTPAIVWISPQRRRITSKTPGRITVLPSG
TLEIRFAKLTDTGTYICIASNAGGNDTYFATLTVHGQPMDAASAFFLNRSMYSGEFFNDT
NMNNTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPTTGSSSGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactggcttttctggccctggtcggtgtgccttagtgccatggctgaaggtgtggaga
tgggtcctggccacctcactggttgctgggattaccttgactctaccagggaacagccag
gcctgtcctccgcggtgtgagtgctcagctcagctgaggtcagtgtcatgccagcggcgg
aggctcgtcaacatccctgagggcattcccaccgagacgaggcttctggacctcagcaga
aatcggcttcgctgggtccaggcgggtgacctttcaccgtacccacggctagaggaggtg
gacctcagtgagaatctcatcgccacattagagcccaatgccttctcagcccttcagaat
cttaaagtgctaaagttaagggggaaccagctgaagttagtgcccatgggagcctttgcc
aaattaggaaacctgaccagccttgacctgagtgaaaacaagatggtgattttactagat
tacaccttccaggatctgaggaatctaaaacacctggaagttggagacaacgatttggtt
tacatttctcacaaggctttctcaggattgctcggactggaggatctcacaatagaacgc
tgtaacctgacatccatttctggccagacgctgtcctatctccgcagtttggtctcgctt
caccttcgtcacctcagcattattgctctggaggaccagaatttccgaaagctctacagc
ttgcggggtctggaaattgatcactggccatatcttgagtacatctccccgctaagtttt
cagggtctggatctccactggctgtccatcacaaacactaacatcacatccgtaccatct
ggctccttcaagaacatggttcacctgacccacctcaatctctcctacaatcctatcacc
acattagagccttgggccttcaaggacttgttgaggttgaaggagctcatcatggtaagc
acagggttggtgactgtcgggccccatgccctcggcggcctcaggcagatacgggtgctc
aacttctcctccaacgacctgcagacgctagaagagagctccttccactctgtcaacagt
ctggagaccctcagagtggacgataaccccctgctgtgcgactgccgtctgttgtggatc
ctgcaaaggcgcaagaccctcaactttgacggcagagtgccggtgtgtgcagggccagtg
gaggtgcagggggtcagcctcagcgccttcactgactctgcactgttcgatcactttaca
tgccagaaacctagaatacgcaaccgtaagatgcagaaggtggttgctaacgaaggtcaa
gcggtgagttttctgtgtcgagctgacggggaacccacgccagcgatcgtctggatttca
ccacaacgcagacggatcacatccaagactccaggacgcatcactgttcttccgagtggg
accctggagatccgttttgccaaactcactgacacaggaacctacatttgcatcgccagc
aacgctggcggcaatgacacttactttgccactctcacggtgcacgggcagccgatggat
gccgcctcagccttctttcttaaccgctccatgtacagcggagagtttttcaacgacaca
aatatgaacaacacacgggttttcctgaagttcaccttggacctgacaaccatcttggtc
tccacggcgatgggctgcatcaccttcctgggagttgtcctcttctgtttcctgctgctg
ttcgtgtggagccgggggcggggccagcgcaggaacaacttcacagtggagtactccttc
cggaaatctgaacccacaaccgggagctcttcaggagggaccaggaagtttaacatgaaa
atgatatga
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