KEGG   Oryzias melastigma (Indian medaka): 112147697
Entry
112147697         CDS       T07439                                 
Name
(RefSeq) vertebrate ancient opsin
  KO
K04256  c-opsin
Organism
oml  Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:oml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:oml01009]
    112147697
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:oml04030]
    112147697
Protein phosphatases and associated proteins [BR:oml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     112147697
G protein-coupled receptors [BR:oml04030]
 Rhodopsin family
  Vision
   Opsin
    112147697
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srx 7TM_GPCR_Srv 7TM_GPCR_Srsx PMT_4TMC
Other DBs
NCBI-GeneID: 112147697
NCBI-ProteinID: XP_024130019
Ensembl: ENSOMEG00000007767
UniProt: A0A3B3D7R5
LinkDB
Position
LG17:25231309..25310678
AA seq 405 aa
MLVSNVSLSGCAEFNSALCAGAGEGHLGGGSYRTTLSPTGHLVVAVCLGFIGTFGLVNNL
LVLVLFCRYKMLRSPINLLLINISISDLLVCVLGTPFSFAASTQGRWLIGEGGCVWYGFA
NSLCGIVSLISLAVLSYERYSTMMTPAEADSSNYRKISLGIVLSWAYSLLWTVPPLFGWS
HYGPEGPGTTCSVDWTAKTANNISYIICLFVFCLIVPFMVIVFCYGKLLYAIKQVSGINV
SMSRKREQRVLFMVVIMVICYLLCWLPYGIMALLATFGPPDLVTPEASIIPSVLAKTSTV
INPVIYVFMNKQFFRCFQAMLRCKAPLRGSSVKSSSKVATKGMRGVAVTGPRRTNDFLFL
VASLGQPAAAVPQLGPSCEPTNDITKAHSSDNKPVVVSLVAHFDG
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgctggtgtccaacgtgagcctgagcggctgtgcggagttcaacagcgctctgtgcgcc
ggagccggggaagggcacctggggggcggttcataccggaccaccctcagcccgacagga
cacctggtcgtggccgtgtgcctcggcttcatcggtactttcggactggtcaacaacctg
ctggtgctcgtgctcttctgccgttacaagatgctgcggtctcccatcaacctgctgctg
attaacatttccatcagcgacctgctcgtgtgcgtgctggggactccgttcagcttcgcg
gccagcacgcagggaaggtggctcatcggagaagggggctgcgtttggtacggtttcgcc
aactccctctgcggcatcgtttccttgatctccctggctgttctttcctatgagcgctac
agcaccatgatgacccccgctgaggcagactcctccaactaccgcaaaatctccttgggc
atcgtcttgtcttgggcttattccctcctgtggactgtgcctccgctctttggctggagc
cattatggtccggagggtccagggaccacctgctctgtcgactggacggccaagacggcc
aataacatatcatacatcatctgtttgtttgtcttctgcctcattgtgcccttcatggtg
atcgtcttctgctacgggaagctactgtatgcaatcaaacaggtgagtgggatcaatgtg
tcaatgagcagaaagcgggagcagcgagttttgttcatggtggttatcatggtgatctgt
tacctgctgtgctggctgccgtatggtatcatggctttgctggccacctttgggccaccg
gacctggtcacaccagaagcaagcatcattccttcagtcctggccaagacgagcaccgtc
atcaacccagtcatctatgtctttatgaataaacagtttttcagatgcttccaggccatg
ctgcgatgtaaagctcctctacgaggctccagcgtcaaaagctcctctaaggttgccacc
aagggcatgcggggggtggcagtgactggtccccggcgcaccaacgatttcctatttttg
gtagcctcactgggtcaaccagccgccgccgtgccccaactgggaccatcgtgtgaaccc
accaatgatatcaccaaagcccactcctcagacaacaaacctgttgtggtgtcactagtg
gcccactttgatggttga

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