Oryzias melastigma (Indian medaka): 112147728
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Entry
112147728 CDS
T07439
Name
(RefSeq) oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112147728
04812 Cytoskeleton proteins [BR:
oml04812
]
112147728
Cilium and associated proteins [BR:
oml03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
112147728
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
112147728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
112147728
NCBI-ProteinID:
XP_036072140
Ensembl:
ENSOMEG00000010578
LinkDB
All DBs
Position
LG17:3040708..3052367
Genome browser
AA seq
2112 aa
AA seq
DB search
MSNTPVQDPPALGGSSDSGQTLPSRALPPATNASGSKRVCFYKSGDYKFTGHRMIITSRT
FKTFDALLDALSKKVPLPFGVRTITTPRGTHLVKALDDLQDGGAYVCSDQKRVKPLNLDE
VTRRQVPWNTTRALSSERRRRQGLRLRLSGRGNDGGGRPVKVTDRVAVRTPKKLVVIKNK
DPSVKRTIVLQRRTAPTFDALLDYLSQILQFPVLKLFSTDGRRVSDQTKEQILTSSSFQF
SGYLQIHTHLFYSKMGDSWSPLLQVDGLAALILCSGVVVAAGKEPFKLGGFRFQRTGQAA
QILYVENVEPATQQSRLQKKKSLTSGRGSKNFSLSSERYIINQIHNSQNGGVNGYQRHGL
DEPESQQSPTPMETYQKDTELPSCIIPHEDDIEKSFRVNQDGSMTVEMKVHLTIKEEEML
HWTTTVSRSSLSRRKVCASASESGNNSPDSNHTVAKDSSNIQEDETKEENHRDGAGRGVG
STGDTPAALGRAKAGFKRTPTPGPRRVNKKASVESVKMVTEKGFQESMMGHYSYVERTAD
GETTEGYCVVRHSSSSSTKPIPKPRKTASAGGRKPPSSVRSSTGSEVLRDPNGGMEVTET
VMHIYETQGCYDNYLANEEYSADGASEGKPSPDSRPLSSNNDCDIDCNWQPPTGDSLVRQ
KEEMLSLSSEPECPTHPLTNNAEIRAEVLQENPPKTTKKKTIGSSASTSSADKKRISPSK
RSKDSSPDKLSSDASAGRKSLNSMESLRNKAAEKPPSTKSVQPKPPAKGSTSASPGYLRR
SSSKSQSTNKPPTKENGHNIDTPTARPQMKKNMSDILQTKKSSSGKKSLSKPKSMIEYKL
SAPKSSSQLSECSSMPSLNPSPSEIHQYVENWLENVTPDQVPCPDEAAGEEVHTKVIFKI
GADSESDDTNESQPLIPESMKKSSSCLSVPLSHEGPAQLHGEQRALGLCVSMPSIRAEPV
NRENRLRSHKSAEVIGAESSETSSAHVLNPKEKIKPVLRQLCSSIQCIRRASTGNSTPAL
QTSSSTPNFSTQVASVFGSSCKAFLSFLSVMTLRENLTADSKPSDGASEALLMLESLQHI
SNIQDEEEQRASLTDLQSRASSHFRERWKDFQILRERLESEPLSPKVSETEFALDVVSEG
GDIFEDQHVGLDELMEEMNMPEDLREQISSTIKSFYPAEESTYVETVKNQSDSEEDVETF
VRESKEETKPLPEVSEETTKENAEHKEESEAENQPSESEDKEKVENEGCGSEEDIQKEEW
EGREDEEEEEKNTGGRNDQQVDQSIASAEKLEEEPGEMGEEFEEEVNVGTDKEIANKETG
NSDENEDTDEREGAVETAEEEEGNSEEEDHEDVEAEEVRCVTVQGEEEEEEEKGEEENHE
DVQEEEAGCATDQGEEEEEEEEEENSEEDYHRDVIDEEAGCATDQGEEEEEEAGEENSEE
EDHRDVIDEETGCATVQGEEEEEEENSEKDDCEDVQDEKDGLATDQGEEEEEEENSEEED
HEDVHKEEVGCGTDQGEEEEDEAGEENNEQDNPKYVPDEGVGSATVQGKEEEEEKNSVED
IDEEIEAGVVERFEEEGETLEMNEEKEEEEEEQFSEGVSEEEQENKEREERKWSEKESEE
EKDKDEGSVEAVEEEERIDDLEGEDDATSEKNEDEDERNGDAQNLNQLDEQPTEQTKASS
LKESRSNAEEEENVESPTKLSSEGPCEDDKGGDSFHETDEGEEEKRSSSSSHPVEISQDL
LDFVNHALRSSSLRFTSDSQGNIRIEPENARVVQTSTRTKEGSYGLKCLPSPITSDLSDY
RPETSESGGYKSQGSVEVSSESGEEPPKKSSPLCSHSGTNVEQSGTKLSVPSSSEAFNSP
SLRSLSSAGDSKALREDLSYFSAASSLKEDPDVQNPPAGGSSPDRESSDGVLIDRGRWLL
KENHLIRKSPPLSMGMYGNLDSSSVDTGQDNTSEDSPPHSKPQHSPLAAISSSDLEEMAK
PGALRCKYFNMPHGSDSDPFLDDASIRSGKLDAAVVKGRGFRVSPTVDTSKTWANRNGSL
SSFASVEFKIPDGKVHPEEAAAVTQPRATSSGEQGALRPQDSVDSLHLRCGQSPPNSIFG
DRPQTSLHFGDI
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacacctgtgcaggaccccccagccctgggggggtcgtctgacagcgggcaa
accctcccctctcgagctttgccgcccgccactaatgcttcagggtccaaaagagtctgc
ttctacaaaagcggggactacaagttcaccgggcatcgtatgatcatcacctcccgcacc
ttcaagaccttcgatgctctgctggacgctctgtccaagaaagtgcctctgccgtttgga
gttaggaccatcaccacgccgagaggaactcacctcgtcaaagctttggacgacttacaa
gacggaggagcctacgtgtgttctgaccagaaacgggtgaagccgctgaacctggacgag
gtgactcggcggcaggttccttggaacaccaccagagcgctcagttcagagcgacgaagg
cgccaaggtctgcggctcaggctttctgggagaggaaacgatggcggtggcaggccggtg
aaggtcactgacagagtggccgtcaggacaccaaagaagctggtggtcatcaagaacaaa
gaccccagtgtgaaacggaccatcgtcctgcagagaagaactgctccaacatttgatgct
ttgctggattacctgtctcagatcctgcagtttccggtgctgaagctcttctcaaccgat
ggtagaagagtaagtgaccaaacgaaggagcagatcctaacttcttcatcattccagttt
tcaggctatttacaaatccacacacacttgttttacagtaagatgggtgattcctggtct
cctcttctgcaggtggacggtctcgctgctctcattctgtgctctggagtcgtcgtagct
gcaggaaaagaaccattcaagttaggaggttttcgtttccagagaacgggtcaggcagct
caaatcctgtatgtggaaaatgtggaaccagcaacacagcagagcagacttcagaagaag
aaatctctcacaagtggaagaggctccaaaaacttctccttgtcatcggagcgatatata
atcaaccagatccacaactctcagaacggcggcgtgaacgggtaccagcgccacggtttg
gatgaacctgagtctcagcagagtcccacgcccatggagacgtatcagaaagacactgag
cttccatcctgcatcataccgcacgaggatgacatcgagaagtcattccgcgtgaatcaa
gacggcagcatgacggtggagatgaaggtccatctgaccatcaaggaggaggagatgctc
cactggaccaccacggtcagccgctccagccttagcaggaggaaagtttgtgcctcggcc
tcggagtcgggcaacaattctcctgactccaaccacactgttgccaaagactcctcaaat
attcaagaggatgaaaccaaagaggagaaccaccgtgatggagcgggaagaggcgtgggc
tccaccggcgacactccggcagctctggggagagctaaagccggcttcaagcggacgccc
acacccggtcctcgacgggtcaataagaaggcctccgtggagagcgtgaagatggttaca
gagaaaggctttcaggagagcatgatgggacattattcctacgtggagaggaccgcggac
ggagagacgacggagggctactgcgtcgtcagacacagcagcagcagcagcaccaaaccc
atccccaaaccgcggaaaaccgcctctgcaggagggaggaagcccccctcctccgtcagg
tcatccacgggatctgaggtcctccgggaccccaacggcgggatggaggtcacggaaacg
gtgatgcacatctacgaaactcaaggctgctatgacaactacttggcgaacgaggagtac
agcgcagatggagcttctgaaggcaagccctccccagactcaagacctctctcctcaaac
aacgactgtgacatagattgcaactggcagccacccaccggtgactcactggtgaggcag
aaagaggagatgctgtcactgtcatccgagccagaatgtccgacacatccgcttacaaac
aatgcggagatccgagcagaagttctccaggaaaacccgcccaaaaccaccaagaagaaa
acaatcggaagctcggcttcaacaagcagcgcggacaaaaaacgaatcagtccctcaaag
cgcagcaaggactcctctccagacaagctcagcagtgacgccagcgctggaaggaagagc
ctgaactccatggagagtctgaggaataaagcagcagaaaagcccccgtctaccaaatcc
gtccagccaaagccccccgctaaaggatcgacctcagcaagccccgggtacctccgaaga
agctcctcaaagagtcagagcacaaacaaaccaccgactaaggagaacggccacaacata
gacacgcccaccgcgaggccgcagatgaagaagaacatgtcagacattttacagaccaaa
aagtcttcttcaggcaaaaagtccctcagcaaaccaaaatcaatgatcgaatataaactg
tctgcaccgaaatcctcctcacagctgagcgagtgcagctcaatgccttctctgaacccg
tctccctcagaaatccaccagtacgtggagaactggctggagaacgtcaccccagaccag
gtgccgtgtccagacgaagctgccggagaagaagtccacaccaaagtcatcttcaagatt
ggagccgattctgagtctgacgacaccaacgagagccagcctctgattcctgagtccatg
aagaagtcctcttcctgcctctccgttcctctttcccatgaaggaccagctcagctccat
ggagagcaaagagccctgggtttatgcgtgtcaatgccgagcatcagagccgagccggta
aaccgggagaaccggctgaggtcgcacaagtccgctgaagtgatcggtgcagagagcagc
gagacctcttcagctcacgttctgaaccccaaagagaagatcaaacccgtcctccgacag
ctctgctcatccatccagtgcatcagaagagcgtccaccggcaactccacgccagctctg
cagacttccagcagcactcccaacttctccacacaggtggcgtcggtgttcggctcgtcg
tgcaaggccttcctttccttcctgtcagtgatgacgctcagagagaacctaacagccgac
agcaagccgtctgacggcgcctcggaggccctgctgatgctggagtccctgcagcacatt
tccaacatccaagacgaagaagagcagagggccagtctgacggatctgcagagcagagcg
tcttcccacttcagggagcgctggaaggacttccagatcctgagggagaggctggaaagc
gaaccactttcccccaaagtctcagagacggagtttgctctggacgtcgtctctgagggc
ggggacatcttcgaggaccagcacgtgggcctcgacgagctgatggaggagatgaacatg
ccagaggacctcagagagcagatatcttcaaccattaaaagcttttatccagctgaggaa
agcacctacgtggaaacggtgaagaaccagtcggactcggaggaagacgtggagacgttc
gtcagagaaagcaaagaggaaactaaacctttaccggaagtttctgaggagacgacgaag
gagaacgctgaacacaaggaggagtcggaggcagaaaaccagccatctgaatctgaagac
aaagaaaaggtggaaaacgaaggttgtggatccgaggaagacatacagaaagaggaatgg
gaggggcgggaagatgaagaagaggaggaaaagaatacaggaggaaggaatgatcagcag
gttgatcaaagcatagcatcagctgagaaactggaggaggagccaggggagatgggggag
gagtttgaggaagaggttaacgtagggacagataaggaaatagcaaataaggaaacagga
aattcagatgaaaatgaggacacagatgagagagagggcgctgtggagacagctgaggag
gaggaaggaaacagcgaggaagaggatcacgaagatgtggaagcagaggaagtaagatgt
gtaactgttcaaggagaagaggaggaagaggaggagaaaggtgaggaagagaatcatgaa
gatgtgcaagaggaggaggcaggatgtgcaactgatcagggagaagaggaggaagaggaa
gaagaggaggagaatagtgaggaagattatcatagagatgtgatagatgaggaggcagga
tgtgcaactgatcaaggagaagaggaggaagaggaagcgggagaagaaaacagtgaagaa
gaggatcatagagatgtgatagatgaggagaccggatgtgcaactgttcagggagaagag
gaggaagaggaggagaacagtgagaaagatgattgtgaagatgttcaagatgagaaggat
ggacttgcaactgatcagggagaagaggaggaagaggaggaaaacagtgaggaagaggat
catgaagatgtacataaggaggaagtaggatgtggaactgatcaaggagaagaggaggaa
gacgaggccggagaggagaacaatgagcaagacaatcctaaatatgtgccagatgaggga
gtaggatctgcaactgtccagggaaaagaagaggaagaggagaaaaacagtgttgaggat
atagatgaagagatagaagcaggtgtagttgaaaggtttgaggaagaaggcgagactctg
gagatgaatgaagagaaggaagaagaagaggaggaacagttctcagagggagttagtgag
gaagaacaagagaacaaggagagggaagaaagaaaatggagtgaaaaagaatcggaagaa
gaaaaagataaagatgaaggaagcgtggaagcagtagaagaggaagaaaggattgatgat
ctggagggagaagacgatgccacctcagagaagaacgaagatgaagacgagagaaacggc
gatgcacaaaatttgaatcaactggacgaacaaccgaccgagcaaacgaaggcctcaagc
ctgaaggaaagcagaagcaacgctgaagaagaagaaaatgtggaatctccaaccaaactt
tcctctgaaggtccgtgtgaggatgacaaaggtggagactcttttcacgagacagacgaa
ggagaagaggagaaaagaagcagcagttcctcacatccagttgagatctcccaggatctc
ctggactttgtgaaccacgccctccgctcttcttctctcagattcacgtctgactctcag
gggaacatccggatcgagcccgagaatgctcgggtcgtacagacgagcacaaggacaaaa
gagggctcgtacggtctgaaatgcctccccagccccatcacctctgacctgtccgactac
agaccagagacgtccgagagcggcgggtacaagagtcagggctcggtggaagtgagctca
gagagcggagaagaaccaccaaagaagtcttcaccgctctgctcacattcaggaacaaac
gtggagcagagcgggacaaaactgtccgtccccagcagctcagaggccttcaacagtcct
tccttaagaagcttgtcttctgctggagactccaaagccttgagagaagatctctcttac
ttcagcgctgccagctcactgaaggaagaccccgacgtccaaaaccctccagctggtggt
tccagccccgacagagagtcatccgacggggttctgatcgatcggggcaggtggctcctg
aaggagaaccacctgatcagaaaatcccccccactctccatgggaatgtacgggaatctg
gacagctcgtccgtggacacgggtcaggacaacaccagcgaggactcgccgccccactcc
aaaccccagcacagcccgctggcggccatctcctcctccgatctggaggagatggccaag
ccaggcgccttacggtgcaagtacttcaacatgccccacgggagtgactctgaccccttc
ctggacgatgccagcatccgcagcgggaagctggatgccgccgtggtaaaagggcggggc
ttcagggtgtcgccgaccgtcgacacctccaaaacctgggccaacaggaacggcagcctg
tcctcttttgcctcagtggagttcaaaatccctgatgggaaggtgcatccagaggaggcc
gcagccgtcacgcagccaagagcgacatctagtggtgagcagggagccctgcggccccaa
gactcggtggactcgctgcacctgcggtgcggccaatctcctccaaactccatatttgga
gatcggcctcagacgtcgctgcactttggtgacatttga
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integrated database retrieval system