Oryzias melastigma (Indian medaka): 112147777
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Entry
112147777 CDS
T07439
Symbol
greb1l
Name
(RefSeq) GREB1-like protein isoform X7
KO
K27478
GREB1-like protein
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
112147777 (greb1l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cpSF2-GREB1
GREB1_2nd
GREB1_C
GREB1_N
TAGT
Pox_A3L
Motif
Other DBs
NCBI-GeneID:
112147777
NCBI-ProteinID:
XP_024130138
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Position
LG17:complement(4543848..4606292)
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AA seq
1974 aa
AA seq
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MSRGGRWCGGVAVRAKQAEKSTIMGNSYAGQLKSARFEEALHNSIEASLRSSNGDPQPIF
TQLYLEPEPYPDVKPKANTTGSDSINGHSSNDLEEAEEDDDSDSSSPPLPYLQTPAPEGC
CTLDDSHTDWKKHPSLLGFCQAGKDIRLVSIATESIEVPAGFELVGAKSPSVPEHILVCA
VDRRFLPDENGKNALLGFSGNCVGCGEKGFRYFTEFSNHINLKLSTQPKKQKHLKYYLVK
NSQGALCKGPLICWKDSKTRQFPSSAAASKPSLSSSLSSKENGGSNGHSLSPFSLSDSPP
TRAAQTSAFFSSQDLGKDCSFLKPLTSTPGNKTLPIVPTALRVNGPTNGIGVDVHPPLLS
PSQVPLGPQGQGYRSADLGDSPVSSAMNSGPPKKRHRSWHPSSVVPVPPTAVPVPAIRPI
VCPPGSVLAVSSPQPPVSAVIQPQPVTAGETVIIPDNLLNSSGVRPVILIGYGTLPYFYG
NVGDIVVSPLLVSCYKSSQLTEKAQETLGLHSSQMLSVETTILLTLQYLGRLGPEQIPLR
EELEQIILKAMLCCPGSPAITPSQLPWLARLEASVSGGTVQVVVTHGSLGEGISESLRSL
SEGPHHQRSLPTYVVVICASKMSGNEFCVLVLGKYQARALAEGMLTTNEFLKEISYELIT
GKVGVLASHFKTTSLGDNLDKQLVRYQRRRKGQVTLPFQGDVPEHFHSQEAASMLPLTDA
EPLQKIFQIYPAQLSVARSLLSQVCSIADSGSQNLDLGRFSKVDFLVLVPPSHILVHQTA
QRIRQSGVLVDLGNEDVSTASQKSDKYVVRLDSDVHARMEAFMKKVKQNPYTLFVLIHDN
AHVDLTSALSGSVCHGELQGLADRVVNCQEVLEALNLLVLQVSCFPYTLQTRQSRISVSN
EIHWPSAESLREQSANELVYFGLRDYSSSLQWGVASPILRCDEAFEKMVLTLLERHSHLH
SMVIRSFLLIQQYTEAMMALTSSPSLRDHITPETLAMVEDLINTPSKEGSQGRGHMLLVR
VPSLQLAMLARERLEDVRDKLGLQFCFAVLLGSPASELSLSRNFISRLRAWRGCENEDWV
PHTYEDLEGLPCIVILTGKDPLGETFPRSLKYSDLRLIDSSYLTRTALEQEVGLACTYVS
VDAVRDPKSGMARRESDAEKAATSINDGEELERPHSNGSAATRTSGSLVENGVSSSDIAD
SSQKPSTSTSHPGDPVTSDIGTLTQVFKQECDSLGSQLSSNPCKASNALPSLYSSSSSSS
PSTTSSSGQKPSQSTQSGQPPPCSSRVSPRTVILSRAAYNLLAGESASQLSSVSLLPHAD
VSWSSPLRPVFTHHLQGAEQSMYYRQWTVARQHHADHEASPVPHPRRLLLSGPPQVGKTG
AYLQLLRLLHRMLIRLLEVDVYDEEEEHEEDEMADVTTPANSQWPDVEEIRKMPFDPTPR
DPKFRKASPVYSHRIPKFFKELRQEGESQTPTKRLTKSIRLSRFAAHNAFHHCEQCHAYC
EAGPAAQLSECTFHAFTFSSSMLGEEVQLQFFIPKAKEKHFVFSQEGSHLECLRLPLVST
KDLDLLKSPIFTPTTGRQEHGLLNLFHAMEGTSHLHILVIKQFEMPHYRKYWPNHILLVL
PAMFNNAGVGAARFMIKELSYHNLELERNRLEEQGVKRQDVWPFVVMMDDSCVQWNAHQS
ADGSDASDPSPSSTNVSLKTVLQHMENTPKILLYAMCGISKWSSSLAGKAPSMPFSRCHL
HDFVLLNVDLTQNVQYDLNRYDCEEVDINLRINSSGLLLCRFNNFSLMKKHIPVGGNKDF
VVKPKLMEIENPAPFSPSQYVCAPDSEQTLLDAPAQFLLERFLQSCSHRLFPKAVRNRNN
PVLSIDSYLNLSPEISVCYINSRPHSTNLNHQGLVFSGLLLYLCDSFVVSGLLKKFRFLK
GATLCVICQDRSSLRQTIVRLELEDEWQFRLRDEFQTANCSEDRPLYFLTGRHV
NT seq
5925 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggtggacgctggtgtggaggcgtggcagttagggcgaaacaggcagaaaaa
tcaactatcatggggaactcgtatgctgggcagctgaagtctgctcggtttgaggaggcc
ctccacaactccatcgaggcatctctgcgctccagcaacggagacccacaacccatcttc
acacagctctacctggagcccgaaccgtatccagatgtgaagcccaaagccaacacgacg
gggagcgacagcatcaacggccactcctccaatgacctcgaagaggccgaagaggacgac
gactccgacagcagcagccctccgcttccttatctgcagacgccagcgccggaaggctgc
tgcaccctggacgattctcacactgactggaaaaaacatccttctctcttaggattctgt
caggctgggaaggacatccgcctggtttccatagcaacagagtcaatcgaagtcccagcg
ggcttcgagctcgtcggcgccaagtcccccagcgtccccgagcacattctggtgtgtgcc
gtggaccgccggtttctgcctgacgagaacgggaaaaatgcacttttaggtttttcagga
aactgcgtgggctgcggtgaaaagggcttcagatacttcacagagttctccaatcacatc
aacctgaagttatccacgcagcccaagaagcagaagcacttaaaatactacctggtgaag
aactctcagggtgctctgtgcaaaggacccctcatttgctggaaagacagcaaaacccgt
cagttccccagcagcgcggcggcctccaagcccagtttgtcgtcctcgctgagcagcaaa
gaaaacggaggctccaacggacacagcttgtctccattctcgctctcagactctccgccc
actagagcagcacaaacgtcggccttcttcagcagtcaggacctgggaaaggactgtagt
ttcctcaaacctctgacctccactcctggaaacaagactctgccaatagtacccacagct
cttagggtaaacggaccaacgaatggaattggcgtcgatgtgcatcctccgttactgagc
ccctcccaggtccctctgggaccccagggtcaggggtatcggagtgcagatttaggggac
agcccggtgtcttctgccatgaactccggtcctccgaagaagcgtcaccgcagctggcat
cccagctcggtggtgccggtcccacccacagcagttcctgttccggcgatccggcccata
gtttgtcctccaggttctgtgttggcggtgtcgtcgccgcagcctccggtctcagccgtc
attcagccgcagcctgtcaccgccggagaaaccgtcatcatccccgacaacctgctgaac
tcctcaggagtccgacccgtcatcctcatcggttatggcactttaccttatttctatgga
aatgttggcgacatagtagtgagccccctgctggtcagttgctataagagcagccagctg
acagaaaaagcccaggagactttaggccttcacagcagccagatgctcagcgtggagacc
accatcctgctcaccttacagtatcttggacggctgggtccggagcagatcccgctgcgc
gaggagctggagcagatcatcctgaaggccatgctgtgctgtcccggcagccccgccatc
actccgtcgcagctgccgtggctggctcgcctggaggccagcgtctccgggggcaccgtc
caggtggtggtgacccacggctctctgggggagggcatctccgagtccctgcgctccctg
agcgaaggtccccaccatcagcggagcctgccgacctacgtggtggtcatatgcgcctcc
aaaatgagcgggaacgagttctgtgtgctggttctgggtaaatatcaagcgcgagcttta
gccgaaggcatgctgaccaccaacgagttcctgaaagaaatcagctatgaactcatcacc
gggaaagtcggcgttctggcctctcacttcaaaaccacctctctcggagacaatcttgac
aagcagctggtgcgataccaacgcagacggaaaggacaggtcaccctgccctttcagggc
gatgtccccgagcacttccactcccaggaggctgccagcatgctgccgctgacagacgca
gaacctctacagaagatcttccagatctatccggcccagctgagcgtggctcgaagtctc
ctctcccaggtctgctccatcgctgattctggctcccagaacctggacctggggcgtttc
tctaaggtggacttcctggttttggtgccgccgtctcacatcctggtccaccaaaccgca
cagcgaatccgacaatcaggagtcctcgtggatttagggaacgaggacgtttccacggcg
agccagaaatcggacaagtacgtggtgcgcctggactctgacgtccacgccaggatggag
gccttcatgaagaaagtcaagcagaacccctacaccctgtttgttctgattcatgacaac
gcgcacgttgacctcacaagtgcgctgtcgggctccgtgtgccacggagagctacagggt
ctggctgatcgagtggtgaactgccaggaggtcctggaggccttgaacctgctggtcctt
caggttagctgcttcccttacaccctgcagacgcggcagtcccgcatcagcgtctccaat
gagattcactggccttccgcggaaagtctgagggagcagtctgctaatgagttggtgtac
ttcggcctgagggactacagcagctccctgcagtggggcgtggccagccccatcctgcgc
tgcgatgaggcctttgagaagatggtcctcactctgctggagagacactcgcacctgcac
agcatggtgatccgcagcttcctgctgatccagcagtacaccgaggccatgatggcgctc
acctcctccccgtccctcagagaccacatcaccccagagacgctggccatggtggaggac
ctgatcaacactcctagtaaagagggctcccagggtcgcggccacatgctgctggtccgc
gtcccctcgctgcagctcgccatgctggcccgagagcggctggaggacgtgagggacaag
ctgggacttcagttctgcttcgccgtgctgctgggcagtcctgcgtctgagctgagcctg
tccaggaacttcatcagtcgcctcagggcgtggagaggctgtgaaaatgaggactgggta
ccacacacctacgaggacctcgaggggctgccctgcatcgtcatcctcacaggaaaagac
cctctgggagaaacctttcccaggtctttgaaatacagcgacctgcgtctgatagactcc
agttacctgacgcgcacggcgctggagcaggaggtgggtctggcctgcacctacgtgtct
gtggacgcagtccgggatccgaagtcggggatggcgcgccgggaatcggacgcggaaaaa
gctgccaccagtataaatgacggagaagagctggagagaccgcacagcaacggcagcgcc
gccaccaggacgtcaggttctctggtagaaaacggagtgagctcgtctgacatcgccgac
tcctcccaaaagccctccacctccacctcccaccccggggaccccgtcacctcagacatt
ggcaccctaacacaagtattcaagcaggagtgcgactctctgggaagccagctttcctcc
aacccctgcaaagcctccaacgccctcccgtctctttactccagctcctcctcttcctcc
ccctccacgacctcttcctctggccagaagcccagccagtccacgcagagcggccaaccg
ccgccctgctcctccagagtgtccccgcggacggtcatcctgtccagagccgcttacaac
cttctggcgggcgagtcggcgagccagctgagctccgtctccctcctgccccacgcagac
gtgtcctggagcagtccgctgaggcccgttttcactcaccacctgcagggggcggagcag
agcatgtattaccgccagtggactgttgctaggcagcatcatgctgaccatgaggcttca
ccggtgccccatccccgacgtctgctgctcagcggaccgccacaggtgggaaaaacgggt
gcctatttacagcttctgcgtctgctccatcgtatgcttatacggctgttggaggtagac
gtgtacgatgaagaggaggagcatgaggaggacgaaatggcagatgtaacaactcctgcg
aattcccaatggcctgacgttgaagaaattcgaaagatgccctttgaccccaccccccga
gaccctaagttcaggaaggccagccccgtttactcccacaggatccccaagttcttcaaa
gaacttcggcaggaaggagaaagccaaacaccgaccaagcgactgaccaagtcgatccgg
ctcagtcgcttcgccgctcacaacgcctttcatcactgtgagcagtgtcacgcctactgc
gaggcaggtcctgctgcacagctgtcggagtgcaccttccacgctttcaccttctcctcg
tccatgctgggagaggaggtccagcttcaatttttcattcctaaagccaaggagaagcac
tttgtgttcagtcaggagggcagccacctggagtgcctgcgtctgcctctggtgtccacg
aaggatctcgatcttttaaaaagtccgatcttcaccccgacgacggggcgccaggagcac
gggctgctcaaccttttccacgccatggagggcacctctcacctgcacatcctggtgatc
aagcagttcgagatgccccactacaggaagtactggcccaaccacatcctgctcgtcctg
cccgcgatgttcaacaacgctggagtcggtgccgcccgctttatgatcaaagagctgtcg
taccataaccttgagctggagagaaaccgcctggaagagcaaggtgtcaaaagacaagac
gtatggcccttcgtggtgatgatggacgactcctgcgtgcagtggaacgcccaccagtca
gcagatggaagtgacgcttcagatcccagcccgtcgtcgaccaacgtgtccctgaaaaca
gtgctgcagcacatggagaacaccccaaagatcctactgtacgccatgtgtggcatctcc
aagtggagcagcagcctggccggcaaggctcccagcatgcctttcagtcgctgccacctg
cacgactttgtcctgctgaacgtggacctgacgcagaacgtccagtacgacctgaaccgc
tacgactgcgaggaagtggacatcaacctgaggatcaacagcagcgggttactgctgtgc
cgcttcaacaacttcagcctgatgaagaaacacattccagtcggaggaaacaaagatttt
gtcgtcaaacccaaactgatggaaattgaaaatccggcaccattcagcccctcccagtac
gtctgcgcccccgacagcgagcagaccctcctcgatgctccggcccagttcctgctggag
agattcctgcagagctgcagccacagactcttcccaaaggcggttcggaaccgaaacaac
ccagttctgtctatcgacagttacctcaacctcagcccggagatctctgtgtgctacatc
aactctcgcccacactccaccaacctcaaccatcagggtttggtgttcagcggcctgctg
ctttacctctgcgactccttcgtcgtctccggactcctcaagaagttccgtttcctgaaa
ggcgccaccctctgcgtgatctgccaggaccgcagctccctgcggcagaccatcgtccgg
ctggagctggaggacgagtggcagttccggctgcgggacgagttccagacggccaactgc
agcgaggatcggccgctctactttctgacggggcgccacgtttga
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