KEGG   Oryzias melastigma (Indian medaka): 112147780
Entry
112147780         CDS       T07439                                 
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
oml  Oryzias melastigma (Indian medaka)
Pathway
oml04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:oml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    112147780 (vti1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oml04131]
    112147780 (vti1b)
Membrane trafficking [BR:oml04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    112147780 (vti1b)
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Sec20 Fusion_gly
Other DBs
NCBI-GeneID: 112147780
NCBI-ProteinID: XP_024130146
Ensembl: ENSOMEG00000022233
UniProt: A0A3B3CS02
LinkDB
Position
LG22:1736040..1741208
AA seq 227 aa
MSSEEFEKLHEIYKSLYDELKLIPERVTKCHGEERKRLVRSFDERQGEAEEVLQGMEDEL
RTAPPSYRNAMSTKLRLYRRDIGKLQRDMKSFAPGFGSASLTAQGDHQGIYASQNQQSTH
LQSQRALLLQGTEYLNNATQSIERSQRIAVETEQIGTDIIEELGGQREQLDRTRDRLVNT
GENLSRSRKVLRAMSRRLMTNKLLLAIIILMELAILGAVIYLKFFRK
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtcgtcggaggaattcgagaagttgcacgaaatctacaaatctttatacgacgagctg
aagttaattcccgagagagtcacgaaatgtcacggagaggaaaggaagaggctggtgagg
agcttcgatgagcggcagggggaagccgaggaggtgttgcagggcatggaggatgagctc
cgaacggcgccgccgtcctacagaaacgccatgagcaccaagctgcgcctgtaccgcaga
gacatcggcaaactgcagagggacatgaaaagctttgctcccggctttggctccgcctcc
ctgacggctcaaggggaccatcagggcatctatgcatcccagaaccagcagagcactcac
ctgcagtcgcagagggcgctgttgcttcagggaacggagtacctgaacaacgccacgcag
agcatcgagcgcagccagcgcatcgccgtggaaacggagcagatcggcacggacatcatc
gaagagctgggggggcaaagggagcagctggaccgaaccagagacagattggtgaacacc
ggagagaacctgagtcgaagcagaaaagttctgcgggccatgtctcgacggctcatgacc
aacaagctgctcctggccatcatcattttaatggagctcgccattctgggcgccgtgatc
tacctgaagttcttccggaagtga

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