Oryzias melastigma (Indian medaka): 112147796
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Entry
112147796 CDS
T07439
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126 isoform X2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112147796
04121 Ubiquitin system [BR:
oml04121
]
112147796
Enzymes [BR:
oml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112147796
Membrane trafficking [BR:
oml04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
112147796
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112147796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
Zn_ribbon_19
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
HypA
zf-Nse
zf-RING_16
C1_2
DUF7560
Motif
Other DBs
NCBI-GeneID:
112147796
NCBI-ProteinID:
XP_024130172
Ensembl:
ENSOMEG00000021160
UniProt:
A0A3B3DX35
LinkDB
All DBs
Position
LG17:12097634..12106064
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AA seq
345 aa
AA seq
DB search
MMFDLFTFPLSELKLGFSCPLPLSVHTVTLHLLKMAEAPPRPCRFFCHRCSAEVTPRLPD
YTCPRCDSGFIEELPEERSFENRSASTSSSSDQNRQSFENMDHQHLFTFPTGYGPFALGI
FDDNFDLRSRLPSEDNREAENRREREMASRQRYSARQPRGRYFPRRQGTRHEGVPTLEGI
IQQLVNGIIAPTAMPNIGMGSWGMLHSNPMDYAWGANGLDAIITQLLNQFENTGPPPADR
ERIKSLPTITITQEHISAGLECPVCKEDYSVDERVRQLPCNHLFHNDCIVPWLEQHDTCP
VCRKSLSGQNTATDPPELSGMNFSPSSSSSSSPSSPSNHNAASNS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgatctcttcacttttcctctcagcgaactcaaactcgggttttcttgtcct
ttaccgctctccgtccacaccgttactcttcatctcctgaaaatggctgaagcccctcca
cggccctgccggtttttctgtcaccggtgctcagcagaggttacaccccgtttaccagac
tacacgtgtccacgatgtgattctggttttatcgaggagctaccggaagaaagaagcttt
gaaaataggtcagcatccacttcctcttccagtgaccagaatcgacaatcctttgagaac
atggatcaccagcatttattcacgtttcccaccggatacggccctttcgccctcggcatc
ttcgacgataactttgacctccgatcgcggttaccctcggaggataacagagaagcagag
aacaggagagagagggaaatggcgtcgcggcaacgatacagtgcacggcaaccacgaggt
cgctacttccctcggcgacagggtacgcgccatgagggagtgcccacattagagggaatt
atccagcagctggtcaatggaatcatagcacctaccgccatgccgaatatagggatggga
tcatggggtatgctgcattccaaccccatggactacgcttggggagctaatggtctggat
gccatcattacacagttgttaaaccagtttgaaaacaccgggcccccgcctgcagaccga
gagagaatcaagagtttaccgacaataactatcacacaggaacacatcagtgctgggttg
gaatgccccgtgtgtaaagaagactacagtgtcgacgagagggttaggcaacttccatgc
aaccatttgtttcataatgactgcatagtgccttggctggagcagcacgatacctgtccc
gtgtgcaggaagagtctaagtggacagaacacagctactgaccccccagagttatcagga
atgaacttttccccttcctcgtcctcttcttcctccccaagctctcctagtaaccacaat
gctgccagcaactcatag
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