Oryzias melastigma (Indian medaka): 112147806
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Entry
112147806 CDS
T07439
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00280
Valine, leucine and isoleucine degradation
oml00650
Butanoate metabolism
oml01100
Metabolic pathways
oml04146
Peroxisome
Module
oml_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
112147806 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
112147806 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
112147806 (hmgcl)
Enzymes [BR:
oml01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
112147806 (hmgcl)
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
TGT
Motif
Other DBs
NCBI-GeneID:
112147806
NCBI-ProteinID:
XP_024130187
Ensembl:
ENSOMEG00000014557
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Position
LG22:17600430..17605089
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AA seq
337 aa
AA seq
DB search
MAAVVRLLNRGVLSSAMGQHYLALSTAAKVQASGLKAGHALPEKVKIVEVGPRDGLQNEK
SIVPTEAKIHLIDMLSESGLQVIEATSFVSPKWVPQMADQVEVMKGIQRKPGVTYPVLTP
NLKGFQAAVKAGASEVAIFGAASELFSKKNINCSVDESLQRFDEVMKAAKEAAVPVRGYV
SCVVGCPYEGKVAPEKVAHVAKRLYAMGCYEISLGDTIGVGTPGSMVDMLEAVTREVPVS
ALAVHCHDTYGQALANILVALQMGISVVDSSVAGLGGCPYAQGASGNVATEDVVYMLHGL
GIQTGVELSKLMDAGAFICRTLNRKSSSKVAQATCKL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtggtcaggcttctcaacagaggggttttaagctcagcgatgggtcaacat
tacctggcgttgagcaccgcagcgaaggttcaagcgagtggcttaaaagcgggccacgcg
ctcccagagaaggtgaagatcgtggaggtgggacccagagatggacttcaaaacgagaag
agcatcgtccctacagaggctaaaattcatttgattgacatgctgtcagagtcaggcctg
caagtcatcgaggccaccagctttgtttctccgaagtgggtccctcagatggctgaccag
gtggaggtgatgaaagggattcaaaggaaaccaggagtgacttatccagtcctcacgccc
aatctcaagggtttccaggctgctgtaaaggcaggagcgtctgaagtcgccatatttggt
gctgcatcagagctgttcagtaagaagaacataaactgctcagtggatgagagtttacaa
cgctttgacgaagtcatgaaagcagcgaaggaggccgctgtgccagttagaggttatgtc
tcgtgcgtcgtcggatgcccatatgaaggcaaggtggcacctgagaaagttgcacatgtg
gctaagcgtctgtacgccatgggctgctatgagatctccctgggcgacactatcggggtc
gggactcctggtagcatggtggacatgcttgaggctgtgaccagagaggtgccagtcagc
gctctggcagtgcactgccatgacacctacggccaggctttggctaacatcctcgtcgcc
ttgcagatgggtatcagcgtggtggactcgtctgtagccggactggggggctgtccgtac
gctcagggggcttctggaaacgttgcgaccgaagacgttgtttacatgctgcacggactt
ggaattcagacgggggtggagctctcaaagctgatggacgctggagctttcatctgtcgg
actctcaacaggaagagcagctccaaagtggcacaggccacctgcaaactgtag
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