Oryzias melastigma (Indian medaka): 112147848
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Entry
112147848 CDS
T07439
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oml04990
]
112147848 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
oml04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112147848 (lrfn5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
C2-set_3
Ig_DSCAM-DSCAML_C
Rop
Sp38
Motif
Other DBs
NCBI-GeneID:
112147848
NCBI-ProteinID:
XP_024130262
Ensembl:
ENSOMEG00000011679
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All DBs
Position
LG22:complement(19402778..19547211)
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AA seq
876 aa
AA seq
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MERLLLCLMLVVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISFITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMTSLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGILSTSSFALSFGG
NPLHCNCELLWLRRLNREDDLETCATPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVSLRCKARGDPEPAIHWISPEGKLVSNSSRTLVYNNGTLDIIITTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSSRGGANGSDVTGDIKSGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKSFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFSTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGGGGKGVSMSMINMHSQTNGQQSTGSNITPSSSKHGSIGLE
DPPAPAKKRGGAAAAGGACGGKDKISQSSECSLPDYFTATSVLSQSWESKSPTSGVEDQE
KASEQRPKTSVVLPASSTGSLHKPKRKPAPSKPASAGSNTAKIPEKLPSTSSPRPTLSSP
ASTTNAAPITSSTPNPIENPNTNRNNSTSLTQIPPPTFTPSPFGSRSAAPSPVPSVRFRE
TPILRRAPRTASSSAKYQTLPVEEGGRSRARRRYSLSEGGSKTYSPHQGAGGAPKLGRLV
RDKRSRSMSGILLPKDEGADSDKGRCDSDWILESTV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctatgtctgatgctggtagttgccatggcagtgagggcacagatt
tgtccaaagcgctgcgtatgtcaaatcctgtcgcccaacctggcaaccctctgtgctaag
aagggcctattgtttgtaccgccaaacatcgacaggcataccgtggaactacgactggct
gacaactttgtcacaagtgtaaaaagaaaagattttgcaaacatgacgcggctggtggac
ctaacattatcccgaaacaccatctccttcatcacacctcatgcctttgccgatttggaa
aatctcagagcgttgcacctgaacagtaaccgcctgacaaggatcggcaatgacacgttt
agcgggatgtctaagcttcatcatctgattctcaacaacaaccagctggtgctgatccat
caaggggctttcaatgacctgcttgcactagaagagttagacctgagttacaacaacttg
gattctattccatgggaggctatacagaaaatgacaagcctccacacgttgagtttagac
cacaacatgctggacttcattcctgagggaaccttttcccttctacagaaactcaaccgg
ctggatgtcacatctaataagcttcaaaagttaccacccgacccactttttcagcgagcc
caggtcctagcaacatcaggcatcctgagcacctcttcctttgccctgtcttttggtgga
aaccccctccactgtaactgtgagttactctggctgaggaggctgaaccgagaggacgac
ctggagacgtgcgccacgcctcagcatctctctggcagatacttctggtccattcccgaa
gaggaattcctctgtgagccccccctcatcaccagatactcccatgagatgagagttcta
gaggggcagagagtttcactcaggtgtaaggcgaggggcgatccagaaccagccattcac
tggatctctcctgaaggcaaactggtgtctaactcctcaagaaccttggtctacaacaac
gggaccctggacatcatcatcaccactgtgaaagacaccggctccttcacctgcatctcc
tccaaccctgctggtgaagcccaccaaactgtggacctggtcatcataaaactcccacac
atctccaataacaccaacaacattcaggagcccgatccgggttcgtccgacatctccacc
tcaagccggggcggtgctaatggcagcgatgtaacaggtgacataaaaagtggggtcgat
aagcgggtggtgaccgctgaggccacatcctcaactgcgctgatcaagttcaacttccag
aggaacataccaggaatccggatgttccagatacagtacaacggaagccaggacgactcg
ctggtctacagaatgatccccccatcaagcaagagcttcctggtcaataatttggcagcg
ggaactcaatacgatctctgtgttttggccatttatgatgatgtcatcacctccctgact
gccacacgggtggtcggctgtgtgcagttctcaaccgagtcagagtacatgagatgtcat
tttatgcagtctcagttcctcggcgggacgatgatcatcatcatcggagggataattgtg
gcctccgtgctggttttcatcatcatcctgatgatacggtacaaggtgtgcaatccaggt
gggggtggtaaaggggtctccatgtcgatgataaacatgcactcgcagacgaatggtcag
cagtcgacaggatccaacataacccccagctcctccaaacacggatccatcggactggaa
gaccctccggcgccagcaaaaaaaagaggtggagcagcagctgcagggggagcatgtggg
gggaaggacaaaatatcccagtcatcggagtgctccctgcctgactacttcaccgcaaca
tcggttcttagccagagttgggagtctaaaagcccgacatccggggtggaggaccaggag
aaagcgagcgaacaaagacctaaaaccagcgtcgtcctgccagcctcctccaccggctcc
ctgcacaagccaaagcgcaagcctgctcccagcaagccggcctccgctggctcaaacacc
gcaaagatacccgagaaactcccatccacctcctctcctcgccccactctgtcctccccg
gcatctacaaccaatgcagctcctatcacctcatctactcccaaccctatagagaaccca
aacaccaaccgcaacaattccacctccctcacccaaatcccacctcctaccttcactcct
tccccgttcggcagtcgttctgccgctcccagccctgttccctctgtgcgattcagagag
actcccatcctgcgcagggcaccgcgcactgcctcatcttctgctaagtaccagactctt
cctgtggaagagggaggcagaagcagagcgaggagaaggtactccctcagtgaagggggc
tcaaagacttactcgccccatcagggcgcgggaggagcgcccaagctggggcgtctggtg
cgggacaaaagaagtcggtcaatgagcggcattctcctccctaaagacgagggtgcagac
tctgacaaaggccgctgtgactctgactggattctggaaagcacagtttga
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