Oryzias melastigma (Indian medaka): 112147899
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Entry
112147899 CDS
T07439
Symbol
pole2
Name
(RefSeq) DNA polymerase epsilon subunit 2
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03030
DNA replication
oml03410
Base excision repair
oml03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112147899 (pole2)
03410 Base excision repair
112147899 (pole2)
03420 Nucleotide excision repair
112147899 (pole2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oml03032
]
112147899 (pole2)
03400 DNA repair and recombination proteins [BR:
oml03400
]
112147899 (pole2)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112147899 (pole2)
DNA replication proteins [BR:
oml03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
112147899 (pole2)
DNA repair and recombination proteins [BR:
oml03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
112147899 (pole2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Dpoe2NT
PigL_N
CLP1_N
Motif
Other DBs
NCBI-GeneID:
112147899
NCBI-ProteinID:
XP_024130321
Ensembl:
ENSOMEG00000014847
UniProt:
A0A3B3C7U8
LinkDB
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Position
LG22:complement(7436074..7441234)
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AA seq
528 aa
AA seq
DB search
MDLPRKIKSKVTAGFKMRGLILRPEASRYLSEVLESVNISELEDVIEKVLDSVEKQPLSS
NMIELAVVETAVQDCTQSCDETIDNIFNIIGAFDVPRYIYNVERKKFLPISMTNHPAPSL
CGSAKDKAELFRERYTILQQRTHRHELFTPPAIGAAVEEGQNKFQLRTIEALLGSTAKLG
EVIVLGMVTQLKEGKFYLEDPSGTVQLDLSKAQFHNGLYTESCFVLAEGWYEDSVFHVNG
FGFPPTEPSSATRSYYGNINFFGGPSSTSVKASSKLKQLEEESEDAMFVIVSDVWLDSVE
VMEKLNIMFSGYAAMPPTCFVLCGNFSSAPYGKTQNRSLKESLKALADMICSYPSIHSSS
RFVFVPGPEDPGPANILPRPPLVQNITQEFSERVPFSVFTTNPCRIQYCSQEIVVVREDL
VNKMCRNCIRLPSSNLDIPNHFVKTILSQGHLTPLPLYVSPVFWAYDYSLRVYPVPDVIV
FADKYDPFTITNTDCLCVNPGSFPKSGFTFKVYYPSNKTVEDSKLQGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatttacctcggaaaataaagtccaaagtgacggctggcttcaagatgaggggactg
atacttcgacctgaagccagtcggtatctttctgaggtgctggaatcagtcaatatctct
gaacttgaggatgtcattgagaaggttctggattcagtggagaagcaacccttgtcctcg
aatatgatcgagctggctgtggttgaaactgctgtacaagactgcacccagtcttgtgat
gaaaccattgacaatatttttaacatcattggagcctttgatgtgcccagatacatttac
aacgtggagaggaagaaatttctacctatcagtatgaccaatcatccagcccccagtctg
tgtggttctgccaaagacaaagctgaacttttcagggagcgctacacaatcttacaacag
cgcacacatcgtcatgagctcttcaccccaccagcgattggagctgctgttgaagaaggt
caaaataaatttcagctcaggacaattgaagcgttgcttgggagcacagctaagctcggg
gaggtaatcgtactcgggatggtcactcaactcaaagagggtaaattttaccttgaagat
ccaagtggaacagtacagctggatttgtccaaagcacagttccataatggcttgtataca
gagtcttgctttgttttggcagaaggatggtatgaggactctgtatttcacgtcaatggc
tttggtttccccccaacagagccttcatcagccaccaggtcctactatggcaacataaac
ttcttcggcggcccgtcgtctacgtccgtcaaggcctcctccaagctcaagcagctggaa
gaggagagcgaagacgccatgtttgtgatcgtctctgacgtctggctggacagcgttgaa
gtgatggaaaaactcaacatcatgttctcaggatatgccgccatgcctccaacttgcttc
gttttatgtgggaacttctcttctgccccgtatgggaaaacacagaacaggtcgctgaaa
gagtcgctgaaagctctggctgacatgatatgttcatatcccagcattcacagcagtagc
cgctttgtgtttgttccgggtcctgaggaccccggaccagccaacatcctgccgagaccc
cctttggtacaaaacattacacaggagttcagtgagagagtgccattctctgtttttacc
accaacccgtgcaggatccagtactgcagtcaggagatcgtcgtcgtcagagaggatctt
gttaacaagatgtgcaggaattgcatcaggttgcccagcagtaaccttgacatcccaaac
cattttgtgaagacgatcctgtctcagggtcatttgactccgctgcctttgtatgtcagt
cctgtgttctgggcctatgactactccctgcgcgtctacccggtgcctgatgtcattgtc
tttgcagacaagtatgaccctttcaccatcaccaacactgactgcctttgtgtcaacccg
ggctcattccctaaaagcggcttcacgttcaaggtgtattacccgtccaacaaaactgtt
gaggacagtaaactccaaggactctga
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