Oryzias melastigma (Indian medaka): 112147942
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Entry
112147942 CDS
T07439
Name
(RefSeq) homeobox protein orthopedia B isoform X1
KO
K24901
homeobox protein orthopedia
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112147942
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
112147942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
112147942
NCBI-ProteinID:
XP_024130410
Ensembl:
ENSOMEG00000000708
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All DBs
Position
LG9:complement(7988177..7992983)
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AA seq
323 aa
AA seq
DB search
MLSHADLLDARLGELSSLNSGPTLQWMKDAAELLGHRDALKCRLGGGVADQGHPGDMAPG
SDSVEGTTLLPGEDITTVGSNSTGMSVNGKEQEKQQQPQQNSGQATSQQKQKRHRTRFTP
AQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPG
TLLPTPGLPQFSAAAAMENSLCSFHANDSRWATGMPGVSQLQLPPALGRQPSMAQSLSQC
SLGPGPPPNSMGLSNGLSSNGSGLQSHLYQSPFPGMSASLSGPTNVSGSPQLCSSPDSDM
WRGTSIASLRRKALEHTVSMSFT
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgctttctcacgccgacctcctggatgctcggctcggtgagttatcatcactaaactct
ggccctactctccagtggatgaaggatgctgcagagctgctcggacacagagatgctctc
aagtgtcggctcggtggtggagtggccgatcaggggcatccgggagacatggcccccggc
tcggactctgtggaagggaccactctcctgccgggggaagacatcacgacggtgggatcc
aactccaccggcatgtcggtgaacgggaaggagcaggagaagcagcagcagccgcagcag
aactccggccaagccaccagtcagcagaaacagaagcggcacaggacgcgcttcacgccg
gcgcagcttaacgagctggagcgcagcttcgccaaaacgcactaccccgatatcttcatg
agggaggaactggcgctgaggatcggcctgaccgagtccagagttcaggtttggttccag
aacagacgcgcaaagtggaagaagaggaagaagaccaccaacgtcttccgcgccccgggc
acgctgctcccgaccccgggcctgccacagttctccgccgcggccgccatggagaacagc
ctgtgctcgttccacgccaacgactcgcgctgggccacggggatgccgggggtctcccag
ctgcagctcccgccggccctgggccgccagcccagcatggcgcagtcgctgtcccagtgc
agtctgggcccgggccccccaccgaactccatgggcctgtcgaacgggttgtcctccaac
ggctcggggctgcagtctcacctctaccagtcgcctttcccggggatgtcggcctctctg
tccggacccacgaacgtatcaggctccccgcagctgtgtagctccccggacagtgacatg
tggagagggacaagcatcgcgtctttgaggcgcaaagcgctggagcacacagtgtccatg
agttttacttag
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integrated database retrieval system
