Oryzias melastigma (Indian medaka): 112148038
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Entry
112148038 CDS
T07439
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112148038 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112148038 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148038 (usp30)
04121 Ubiquitin system [BR:
oml04121
]
112148038 (usp30)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112148038 (usp30)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112148038 (usp30)
Membrane trafficking [BR:
oml04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
112148038 (usp30)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112148038 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
112148038
NCBI-ProteinID:
XP_024130587
Ensembl:
ENSOMEG00000002256
UniProt:
A0A3B3B876
LinkDB
All DBs
Position
LG9:18816358..18821819
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AA seq
500 aa
AA seq
DB search
MLWLRHESCDKLIGRFLGTGSGIRNKMIKNWGVIGGIAAAVAAGAYVLWGPITERKKRKK
GMAPGLLNLGNTCFLNALLQGLAACPSFIRWLEKFSGLPTIQSCKDNQLSTTLLQLLKAL
SSDEPGEEDVLDAGCLLDVLRLYRWHISSFEEQDAHELFHVITSSLEEERDRQLKVTHLF
DVQSLESFPNPDDKAVACISRAPLHPIPGPWKFPHPFHGRLTSNMSCKRCETQSPVRYDS
FESLSLSILLPQWGRPISLDQCLQHFISSETIKEVECENCTKLQQHSSINGEVLENQRTT
FVKQLRLGKLPQCLCIHLQRLMWSNEGSPIKRQEHVQFSEYLSMDRYKHDSSTPRTQKVR
CAPKTIKAESFDDSIEKPTANGTEHHNNNKPFTNGTCSSMFLHSGVKNPFGLTYDYSSAE
YLFQLVAVLVHLGDMHSGHFVTYRRCPSSSRCSSNFSSQWLWVSDDSVRKASLQEVLSSN
AYMLFYERVQRPGRGPRSEE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggctcagacatgaaagctgcgataagcttattgggaggtttcttggcaccgga
tctggaatcagaaacaaaatgatcaaaaattggggcgtcatcggggggatcgcagctgct
gttgcagctggagcatacgtcctgtggggcccgattacagagagaaagaagaggaagaaa
gggatggctccaggtctgttgaatctgggaaacacctgctttctgaacgctctgctccaa
ggcctggcggcgtgtccgtccttcatcaggtggctggagaaattttccggtttgcccacc
attcagtcgtgcaaagacaaccagctgtcgacaacgctgctgcagctactcaaagctctg
agtagtgatgaacctggagaggaagatgttcttgacgctgggtgcctcctggatgtactc
agactgtatcgctggcacatcagttcttttgaagagcaggatgctcatgagctttttcat
gtcatcacatcctctctggaggaggagcgagatcgtcaactgaaggtcacacatttgttt
gacgtgcagtctcttgagagttttcctaatccagatgataaagctgttgcctgtataagt
agagccccccttcacccgataccaggtccttggaagtttccgcatcctttccatggccgg
ttaaccagcaacatgtcatgcaagcgctgtgaaacgcaaagtccagtgcggtacgactcc
tttgagagcctttctttgtccatcctcctacctcagtggggtcgcccaatctcactagat
caatgtctgcagcactttatttcctctgaaaccatcaaagaagtggaatgtgaaaactgc
acaaagcttcaacaacattcatcaataaacggggaagttctagaaaaccagaggacgaca
tttgttaaacagctgagacttggaaagctccctcagtgcctctgcatccacttacaaaga
ctgatgtggtccaatgaaggctcccccatcaagcgccaagagcacgttcagttctcagag
tatctgtcaatggatcgttacaaacacgacagctccacgccgaggacgcagaaggtcaga
tgtgctcctaaaaccataaaggcggaaagctttgatgattccatagaaaagcctacagct
aatgggactgaacatcataacaacaacaaacctttcacaaatggaacctgttcttctatg
tttcttcattctggtgttaaaaatccctttggcctcacttacgactacagttctgcagag
taccttttccagctggtggctgttctggttcatcttggtgacatgcactcgggacacttc
gtcacatatcgccgctgcccctcctcctctcgctgctcttcaaacttcagctcccagtgg
ctttgggtgtcagacgactcggtccgtaaagccagcctgcaggaggtgctgtcctccaac
gcttacatgctcttctacgagagagttcagaggcccggacgaggcccgcggtcggaggaa
tga
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