Oryzias melastigma (Indian medaka): 112148041
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Entry
112148041 CDS
T07439
Symbol
ssh1a
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112148041 (ssh1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112148041 (ssh1a)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
112148041 (ssh1a)
3.1.3.48 protein-tyrosine-phosphatase
112148041 (ssh1a)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
112148041 (ssh1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_SSH1-like_1st
DSPc
DEK_C
PTP-SAK
Tc-R-P
Y_phosphatase
DUF7045
Motif
Other DBs
NCBI-GeneID:
112148041
NCBI-ProteinID:
XP_024130593
Ensembl:
ENSOMEG00000002218
LinkDB
All DBs
Position
LG9:complement(18783817..18802796)
Genome browser
AA seq
1034 aa
AA seq
DB search
MALVTLQRSPTPSAASSASTATTTGGEDFGSEDERRINQSLSESFFMVKGAALFLQQGSS
PQGQKAHPPHKHAGDLPQHLQVMINILRSEDRIKLAVRLESARSDRVRYMVVVYTSGRQD
TEENILLGIDFNNKEGKSCSVGMVLPLWSDTKIHLDGDGGFTVNTAGRTHVFKPVSVQAM
WSALQVMHKACEVSRRFNYFPGGMALTWMGYYESCIASDQSCINEWNAMKDLETTRPDSP
IMFVDKPSERERTECLIKAKLRSIMTCQDLENVTCKQIRTELEQNMNCNLKEFKEFIDNE
MLLILGQMDKATLIFDHVYLGSEWNASNLEELQETGVSYILNVTREIDNFFPGTFSYHNV
RVYDEDSTDLLAHWNETYNFIVKAKKNHSKCLVHCKMGVSRSASTVIAYAMKEYGWSLEK
AYNFVKEKRNITRPNPGFMRQLAEYEGILDASKQRHNKLWQPDTDCEMADSQQGVAQHCG
GEEGEHLTPEPGMFPCCEEELSEKGAACPSQYRTVSLEIDPAYNNYYFRRLSDSALDSEP
STPVRGPPLLSMEKVFIEIDDVERDALLDDEAFDGNEGLPLSHFGTTAEGTAAQTCGRGA
EPLEELRLRLEFSTVEEEDEEDVQKEEAEMEVLMQPDEGGGGEGNGSETQYAEAEGDAEG
IGMDLATLNENSNNNNNRLSIMRDCNENAPFILLPSETSMLSRLDQTKSCWKNESSTPTP
KLCLNPSSSPKVPSAFSPHSHTSPEGVPSSVELLCPCGPLCNCANCAASLPAAPLNEDDN
PGDPLQLVELEDIGIFLEKKTDTSESRSAAASESLPELMTVDVKEEKPAVARYLGKQESL
MQLHQSGLVRQRAERLERLSGLSQQSLQTLKPLQTCQRSQKGSPHDNKEEEFPSFAGDLA
NSSTPCQVRLEYPMVPLTNESLFGAAGSGLFTPTSSPHGSTLTRSSSSDSLRSVRGKPGL
VRQRAQEIETRMRLAGLTVPSSLKRSNSLAKLASLDLSSEDLCSACSSDAGTLLLLTLSP
EPDLHSPLLGDPKS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggttaccctgcagcggtccccgactccaagcgccgcatccagcgccagcacc
gctaccacgacgggaggcgaggattttgggagtgaagatgagcggcgaataaatcagagc
ctgagcgagagcttcttcatggtgaagggtgctgccctgttcctccagcagggaagcagt
ccccagggccagaaagcacatcctccccacaaacatgcaggtgacctaccccaacactta
caggtgatgataaacatcctgcgctcagaggacagaatcaaactggcggtgcggctggag
agtgcacggtcagaccgcgtgcgctacatggtggtggtttacaccagcggtcgacaggac
acagaggagaacattcttctaggaatcgacttcaataacaaagaaggtaaaagttgttca
gttggaatggtgctacctctgtggagtgatacaaagatccatctggatggagatggcggc
tttacagtgaacacagcaggtcggactcatgtcttcaaacctgtgtcagtgcaggcgatg
tggtcagccttgcaggtgatgcacaaagcttgcgaagtttcacgcaggtttaactatttc
cctggaggtatggctctcacctggatgggctactatgaaagctgcatcgcttcagaccag
agctgcatcaatgagtggaacgctatgaaggacttagagacgacacggccagattcaccc
atcatgtttgtcgacaagccgtcagagagagaaagaacagagtgccttattaaagccaaa
ctcagaagcatcatgacgtgccaggacctcgagaacgtcacctgcaaacagatccgcaca
gagttggaacagaacatgaactgcaaccttaaggaattcaaagaattcattgataatgaa
atgctgctaattcttggacagatggataaagctactctcatctttgaccatgtctacctg
ggatctgagtggaatgcgtctaatttggaggagctgcaagagacgggggtgagctacatt
ctcaacgttacccgggagatcgacaacttcttccccgggacgttcagctaccacaacgtg
cgcgtttacgatgaggattccaccgacctgctcgcccactggaacgaaacctacaacttt
atcgtcaaagcaaaaaaaaatcactccaagtgtcttgttcactgtaagatgggcgtcagt
cgctctgcctctactgtcattgcgtacgccatgaaggagtacggctggtcgctggagaag
gcgtacaactttgttaaggaaaagagaaacatcacacgacccaatccaggtttcatgagg
cagcttgcagagtatgaaggcattttagatgccagcaaacagcggcacaacaagctgtgg
caaccagacacggattgtgagatggcggacagtcagcagggggtggcccagcactgtggg
ggcgaggaaggagagcatctgactccagagccggggatgtttccctgctgtgaggaggag
ttatcagagaaaggtgcagcgtgcccctcccagtacaggactgtttccctggaaattgac
ccagcctacaacaattactatttccgccgactctctgattcagccctggatagcgagccg
tcaacgccagtccgcgggcctcctctcctcagcatggagaaagtatttatagaaatagat
gatgtggagcgtgatgctctgctggatgacgaggcctttgacgggaatgagggcctgccg
ctctcacactttggaaccacggcagaaggtactgccgcccagacgtgcggccgtggcgcc
gagcctttggaggagctgcgtcttaggctggagttcagcacagtcgaggaggaggatgag
gaggatgtgcaaaaggaagaagcggagatggaggtactaatgcagccggacgagggaggc
ggcggtgaaggaaacgggagtgaaacacagtatgcagaggcagaaggagatgcagagggc
atcgggatggacctggcaaccctcaatgaaaactccaacaacaacaacaaccgcttgagc
atcatgcgtgactgcaatgaaaatgcacctttcatccttcttccaagtgaaacttctatg
ctgtctaggttggatcagactaagtcctgttggaaaaacgagtcttcaaccccaactcct
aagctttgccttaaccccagctcttccccaaaagtcccaagtgctttttccccacattcc
catacctctcctgaaggtgtcccatcttcagtggagctgctatgcccctgtggcccgctg
tgtaactgtgccaactgtgctgcctctctacctgctgctccacttaacgaagacgacaac
ccaggagatccactgcagttggttgagctggaggacattgggattttcctcgagaaaaag
actgacactagtgagagccgctctgcagctgcttctgagtctctgcctgaactgatgaca
gtggacgtgaaggaagagaagcctgcagtggctcgatacctggggaaacaggagtcccta
atgcagctgcatcaatctgggttggtccgccaacgcgcagagagactagagagactgtca
ggtttgtctcagcagagcctgcagactttgaagcctttgcaaacatgccaaaggtcccag
aaaggttctccccatgacaacaaggaagaagagttccccagttttgcaggtgatttagct
aattcttcaacaccatgccaagtgcggttagagtacccgatggtgccactgaccaatgag
tccttgtttggggcggcggggtctgggcttttcacgcccacctcttcgccccacggctcc
accctaacacgcagctccagcagcgatagtctccgcagcgttagggggaaacctggcctt
gtgcgtcagagagctcaagagatcgagacccgcatgcgtctggcgggcctcaccgtgccc
tccagcttgaagcggtccaactctcttgccaagctggccagcctggacctctcgtcggag
gacctgtgctcggcctgttcctctgatgcaggaaccctgctgctcctgaccctgtctcca
gagccagacctgcacagtccacttctaggtgaccctaaaagttga
DBGET
integrated database retrieval system
