Oryzias melastigma (Indian medaka): 112148090
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Entry
112148090 CDS
T07439
Symbol
lrrc8ab
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oml04040
]
112148090 (lrrc8ab)
Ion channels [BR:
oml04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
112148090 (lrrc8ab)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_LRWD1
LRR_At5g56370
Sp-CxC
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
112148090
NCBI-ProteinID:
XP_024130657
Ensembl:
ENSOMEG00000011279
LinkDB
All DBs
Position
LG9:3034312..3046373
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AA seq
795 aa
AA seq
DB search
MIPITELRYFVDTQPAYRILKPWWDVFTDYISIVMLMISVFGGTLQITQDKMICLPCKWV
VNQTCKKNFSSTVSSSLFMEPKGIQYDLDRHQYNYVDAVCYENRLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKPMKMNGSVD
HKESVISEDVEASVPMLQRTKTRFEQGIVDRTETGVLDKKEGEQAKALFEKVKKFRIHVE
EGDIVYRLYIRQTIIKVIKFVLIICYTGYYVHDIKFSVDCAVNIESLTGYSVYRCAHPLA
TLFKILACFYISLVVVYGLICMYTLCWMLRRSLKKYSFESIREESSYSDIPDVKNDFAFM
LHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLDKLRQRITKNSQEKLELHLFML
SGIPDTVFDLMELEVLKLELIPDVTIPPIIAQLVNLREMWLYHTPAKIEAPALAFLRENL
KSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRYIVIDGLRELKRLKVLRLKSNL
TKLPQVVTDVGMHLQKLSINNEGTKLMVLNSLKKMVNLTELELIRCDLERVPHSIFSLHN
LQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLNNLEKLYLNRNKIE
KIPSQLFFCRKLRILDLSHNNLTTIPADIGFLQNLQYLAVTANRIESLPNELFQCKKLRT
LNLGNNCLQSLPSRFGELTALTQLELRGNRLECLPVELGECRQLKRTGLVVEEDLFNTLP
SEVKELLWKADKEQA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgatacccatcactgaactgcggtacttcgtggatacacagccagcttaccgcatcctg
aagccatggtgggacgtgttcacggactacatttctatcgtcatgctgatgatttccgtg
tttggaggaacgctgcagatcactcaggacaaaatgatctgcctgccctgcaaatgggtc
gtcaaccaaacctgcaagaagaactttagctcgactgtatcctcgtccttgttcatggaa
cccaaagggatccagtatgatttggaccgacaccagtacaactacgttgatgccgtgtgc
tacgagaacagactgcactggtttgccaagtactttccctacttagtattacttcacacc
cttatttttctagcttgcagcaacttttggttcaagtttcctcggactagctccaaactg
gagcactttgtttccatcttgctgaaatgcttcgactctccgtggacgaccagggctctg
tcggagacggtggtcgaagaaagcgacccgaaacccatgaaaatgaacggctcagtggac
cacaaagaatcggtcataagtgaagacgtggaagcgagcgtcccgatgctccaaaggaca
aagacgcggttcgagcagggcatcgttgatcggacagaaacgggagtcttggacaaaaaa
gaaggcgagcaagccaaagctctgtttgaaaaggtgaagaagttccgcattcacgtggag
gaaggagacatcgtgtaccgactgtacattcgccagaccatcatcaaagtcatcaagttt
gttttgatcatctgctacacagggtattacgtgcacgacatcaaattcagcgtggactgc
gctgttaacatagagagcctgactggttatagtgtttaccgctgtgctcacccgctagcg
actcttttcaaaatcctagcttgtttctacataagcctggttgtggtttacggtttgatc
tgcatgtacacactttgctggatgctgcgtcgctctctgaagaagtattccttcgagtcg
attcgggaagagagcagctacagcgacataccggacgtcaagaacgactttgcgttcatg
ttgcacatgatcgaccagtatgacccgctttactccaaacgcttcgccgtcttcctgtca
gaagttagcgagaacaagctgaggcagctcaacctcaacaacgagtggactctggataag
ctcaggcagaggatcaccaagaactctcaggagaagctggagttgcacctctttatgttg
agtggcatcccagacaccgtgtttgacctgatggagctggaggttctgaagctggagctg
attcctgatgtcaccattcctcccattatcgcccagctggttaacctgcgagagatgtgg
ctttatcacaccccagctaaaatagaagcgcctgctctggcttttttgcgtgaaaacttg
aagtccttgcatatcaagttcacagacataaaagaaatccctttatggatctacagccta
aagaatctcagtgagcttcatctgacggggaacctcagcgccgagaacaaccgttacatc
gtcatcgacggcctccgggagctcaagaggctcaaagttcttcgtctgaaaagcaatcta
accaagctacctcaagtagtgactgatgtgggcatgcacctccaaaagctgtccatcaac
aatgaaggaaccaagctgatggtcctgaacagcctgaagaagatggtcaatctgacggag
ctagagctcattcgctgtgatctggagcgagtcccacactccatcttcagtttgcacaac
ctgcaggaaatcgacttgaaggacaacaacctgaagaccatcgaggagatcatcagcttc
cagcacctccaccgtctggtctgcctgaagctctggtacaaccagatcgcttacattccc
atccagatcggcaccctaaacaatctggaaaagctctacctgaacagaaacaagatcgag
aagatccccagccagctgtttttttgccgcaagctgcgtatcttggacttgagccacaac
aacttaacaactatcccagcagacatcggcttcctgcagaatcttcagtacctggcagtg
acggctaacaggatcgagagtctgccaaatgagctcttccagtgcaagaagcttcgcact
ttgaacttgggaaacaattgcctgcagtctctgccgtcccgcttcggcgagctgaccgca
ctgacgcagctggagctcagaggaaaccgtctggagtgtcttcccgtggagctgggggag
tgccggcagctgaagcggaccggtctggtggtagaggaggaccttttcaacaccctgccc
tccgaagtcaaggaacttttgtggaaagctgataaggaacaggcttga
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